Skip to main content
. 2017 Mar 14;12(3):e0173824. doi: 10.1371/journal.pone.0173824

Table 2. Data summary from RNA-seq.

Sample1 Raw reads Clean reads Clean bases Valid ratio (%) Q30(%) GC content (%) Total mapped reads Mapping ratio (%)2
M4W-1 63390474 59877776 8976603064 94.40 92.44 50.50 42743796 71.39
M4W-2 62481624 59772130 8961396183 95.61 93.81 50.50 42391042 70.92
M4W-3 60332474 55438788 8310479464 91.82 89.62 49.50 39977813 72.11
M12W-1 64907194 60904330 9130228864 93.77 91.73 50.50 43150444 70.85
M12W-2 67880554 64278528 9636498748 94.64 92.71 50.50 46253368 71.96
M12W-3 63800848 60591442 9083866415 94.91 92.37 49.50 44956120 74.20
M16W-1 60207798 57616766 8638195009 95.64 93.86 49.50 43937315 76.26
M16W-2 63781302 60234872 9030243563 94.38 93.04 50.50 46392239 77.02
M16W-3 63639886 59723634 8953287453 93.79 91.74 50.00 45074618 75.47

1M4W, M12W, and M16W indicate muscle samples at 4, 12, and 16 weeks of age, respectively.

2Mapping ratio indicates the level of total mapped reads as a proportion of clean reads.