Table 1. The top 10 genes in betweenness, degree, closeness and DCLs enrichment of differential mRNA-lncRNA crosstalk networks.
Betweenness | Degree | Closeness | DCLs enrichment | Overlaps | |
---|---|---|---|---|---|
Network 1 | PVT1 | PVT1 | PVT1 | PVT1 | PVT1 |
SNHG14 | SNHG14 | SNHG14 | LINC00152 | SNHG14 | |
RP11-834C11.4 | RP11-834C11.4 | SLC16A14 | LINC00689 | RP11-834C11.4 | |
LINC00240 | LINC00689 | RP11-834C11.4 | RP11-834C11.4 | LINC00240 | |
LINC00152 | LINC00152 | LINC00240 | SNHG14 | LINC00152 | |
BOLA3-AS1 | FENDRR | LINC00152 | FENDRR | FENDRR | |
LINC00689 | LINC00240 | PPFIA1 | BOLA3-AS1 | BOLA3-AS1 | |
FENDRR | BOLA3-AS1 | FENDRR | HOXA-AS2 | ||
HOXA-AS2 | HOXA-AS2 | BOLA3-AS1 | H19 | ||
EPB41L4A-AS1 | MAGI2-AS3 | IKBIP | LINC00240 | ||
Network 2 | LINC00240 | LINC00240 | LINC00240 | LINC00240 | LINC00240 |
SNHG1 | SNHG1 | SEMA6D | AP000525.9 | SNHG1 | |
RP11-361F15.2 | AP000525.9 | SNHG1 | AC156455.1 | RP11-361F15.2 | |
AP000525.9 | RP11-588K22.2 | RP11-588K22.2 | RP11-588K22.2 | AP000525.9 | |
RP11-588K22.2 | RP11-361F15.2 | PCDH19 | RP11-677M14.3 | RP11-588K22.2 | |
RP11-677M14.3 | AC156455.1 | AP000525.9 | RP11-361F15.2 | AC156455.1 | |
SNHG14 | SNHG14 | PTPDC1 | SNHG1 | ||
AC156455.1 | AC009948.5 | AC156455.1 | FLG-AS1 | ||
FLG-AS1 | FENDRR | RP11-361F15.2 | RP11-115C21.2 | ||
AC009948.5 | RP11-677M14.3 | MET | TINCR |
Overlaps contains the lncRNAs that appeared in each dimension. Cancer-related lncRNAs were highlighted in bold font.