Table 2.
The alleles identified in Canadian specific pathogen-free Yorkshire and Landrace pigs which confirmed the unassigned alleles and standardized nomenclatures of the previously unconfirmed alleles in the GenBank database.
| Locus | Allele | GenBank accession number |
Official International Society for Animal Genetics designation | |
|---|---|---|---|---|
| Submitted in this study | Previously submitted | |||
| The unassigned allele with complete coding sequence | ||||
| SLA-1 | SLA-1*dxbm05 | KU754554 | KX056221 | SLA-1*07:04 |
| SLA-1*wzs01 | KT194212 | |||
| SLA-1*bm04 | KT350995 | |||
| – | KU754558 | AK351685 | SLA-1*08:11 | |
| SLA-2 | – | KU754568 | DQ992497 | SLA-2*16:03 |
| – | DQ992498 | |||
| – | DQ992499 | |||
| – | KU754570 | AK239592 | SLA-2*10:06 | |
| The unconfirmed allele with complete coding sequence | ||||
| SLA-1 | SLA-1*08pt13 | KU953375 | EU440337 | SLA-1*08:07 |
| SLA-1*08sk11 | KU754548 | EU440332 | SLA-1*08:08 | |
| SLA-1*11jh02 | KU754550 | DQ883209 | SLA-1*11:03 | |
| SLA-2 | SLA-2*w09pt22 | KU953376 | EU432085 | SLA-2*09:03 |
| SLA-2*10es21 | KU754565 | EU432090 | SLA-2*10:04 | |
| SLA-2*10sk21 | KU754566 | EU432083 | SLA-2*10:05 | |
| SLA-3 | SLA-3*03pt31 | KU953377 | EU432095 | SLA-3*03:06 |
| SLA-3*hb06 | KU754583 | AP009559 | SLA-3*04:04 | |
| The unconfirmed allele with partial coding sequence | ||||
| SLA-1 | SLA-1*rh03 | KU754555 | AF074427 | SLA-1*07:03 |
| SLA-2 | SLA-2*05rh03 | KU754569 | AF074428 | SLA-2*05:05 |
| DRB1 | DRB1*06sL47 | KU754601 | L08847 | DRB1*06:07 |
| DQB1 | DQB1*0203 | KU754591 | AB012093 | DQB1*02:03 |
| AF113970 | ||||
| DQB1*0204 | KU754590 | L08844 | DQB1*02:12 | |
| EU039916 | ||||