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. 2017 Mar 15;8:404. doi: 10.3389/fmicb.2017.00404

Table 1.

Identification of proteins related to NPQ (non-photochemical quenching) in Karlodinium veneficum based on RACE and iTRAQ analysis.

Sequence ID DinoSL ORF length (bp) Deduced protein length (aa) Annotation source Description E-value Identity (%)
Karve LHCX 1 783 261 NCBI Blastp fucoxanthin chlorophyll a/c LI818 clade [Chrysochromulina sp. CCMP291] 5.00E-25 42
Karve LHCX 2 831 277 NCBI Blastp plastid light harvesting protein LI818 [Dinophysis acuminata] 3.00E-30 40
Karve LHCX 3 753 251 NCBI Blastp fucoxanthin chlorophyll a/c protein, LI818 clade [Thalassiosira pseudonana CCMP1335] 6.00E-29 40
Karve LHCX 4 747 249 NCBI Blastp plastid light harvesting protein LI818 [Dinophysis acuminata] 2.00E-52 54
Karve LHCX 5 786 262 NCBI Blastp fucoxanthin chlorophyll a/c protein, LI818 clade [Thalassiosira pseudonana CCMP1335] 1.00E-26 37
Karve PHOT2 825 275 Uniprot_ Swissprot Phototropin-2[Arabidopsis thaliana] 1.00E-11 60
Karve VDE1 1326 442 NCBI Blastx violaxanthin de-epoxidase [Chrysochromulina sp. CCMP291] 7.00E-136 63
Karve VDE2 1203 401 NCBI Blastx violaxanthin de-epoxidase [Chrysochromulina sp. CCMP291] 9.00E-165 73
Karve ZEP 1740 580 NCBI Blastx zeaxanthin epoxidase [Chrysochromulina sp. CCMP291] 0.00 61