Table 4. Two-way gene-gene interaction models by using the GMDR method with adjustment for age and gender.
Phenotype | Two-way interaction model | Testing accuracy (%) | P value |
---|---|---|---|
MetS | ARNTL rs10832020, GSK3B rs2199503 | 52.92 | 0.039 |
ARNTL rs10832020, PER3 rs10746473 | 53.33 | 0.021 | |
ARNTL rs10832020, RORA rs8034880 | 55.01 | < 0.001 | |
ARNTL rs10832020, RORB rs972902 | 52.92 | 0.032 | |
GSK3B rs2199503, PER3 rs10746473 | 53.15 | 0.027 | |
GSK3B rs2199503, RORA rs8034880 | 55.09 | < 0.001 | |
GSK3B rs2199503, RORB rs972902 | 54.04 | 0.002 | |
PER3 rs10746473, RORA rs8034880 | 54.78 | < 0.001 | |
PER3 rs10746473, RORB rs972902 | 55.19 | < 0.001 | |
RORA rs8034880, RORB rs972902 | 53.96 | 0.008 |
GMDR = generalized multifactor dimensionality reduction, MetS = metabolic syndrome. P value was based on 1,000 permutations. Analysis was obtained after adjustment for covariates including age and gender. P values of < 0.005 (Bonferroni correction: 0.05/10) are shown in bold.