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. Author manuscript; available in PMC: 2018 Mar 1.
Published in final edited form as: Cytoskeleton (Hoboken). 2017 Jan 24;74(3):125–142. doi: 10.1002/cm.21352

Table 2.

Nucleotide sequences of the primer-pairs used for qRT-PCR

Name Gene Isoform Primer/cDNA Sequence Reference
Zb.Fish.TPM4-1α (+)
Zb.Fish.TPM4-1α (−)
Zb.Fish.TPM4-1Ex9A(−)
TPM4-1
TPM4-1
TPM4-1
TPM4-1α
TPM4-1α
TPM4-1
Primer
Primer
cDNA
5′-AGAAGACAAGTATGAAGAAG-3′
5′-GTAGAGCGAGACAGATGGAT-3′
5′CAGGGATGTCGTGTCATTGAGAGCATGA-3
BC085518
BC085518
BC085518
Zb.Fish. TPM4-2α (+)
ZB.Fish. TPM4-2α(−)
ZB.Fish.TPM4-2 Ex9A(−)
TPM4-2
TPM4-2
TPM4-2
TPM4-2α
TPM4-2α
TPM4−2
Primer
Primer
cDNA
5′-AAGAGGACAAATATGAGGAT-3′
5′-ATACCATCTATAGGCACTCAT-3′
5′-CACAGTTCTGATTCAGTTATA-3′
Zb.Fish.TPM1-1α(+)
Zb.Fish.TPM1-1α(−)
Zb.Fish. TPM1-1κ(+)
Zb.Fish. TPM1-1κ(−)
Zb.Fish.TPM1-1Ex9A(−)
TPM1-1
TPM1-1
TPM1-1
TPM1-1
TPM1-1
TPM-1α
TPM-1α
TPM-1κ
TPM-1κ
TPM-1α&κ
Primer
Primer
Primer
Primer
cDNA
5′-AGAAAGCTGCGGAGGACAAAT-3′
5′-TCCTCCACCAGCTGAATCCTG-3′
5′-CAGTTAGAAGACGAACTAA-3′
5′-ACATCACCTTCAGCCTTG-3′
5′-AAGTCATGTCATTGAGAGCG-3′
NM_001024467.1
NM_001024467.1
This study
This study
NM_001024467.1
Zb.Fish.TPM1-2α(+)
Zb.Fish.TPM1-2α(−)
Zb.Fish.TPM1-2ν (+)
Zb.Fish.TPM1-2ν (−)
TPM1-2
TPM1-2
TPM1-2
TPM1-2
TPM1-2α
TPM1-2α
TPM1-2NeW
TPM1-2New
Primer
Primer
Primer
Primer
5′-TGACTGACAAGCTGAAGGAGG-3′
5′-GCCCGGAGCCGAGATGAGATGT-3′
5′-CCCTGAACAGACGCATCCAGC-3′
5′-TGGTCTTCTCAAGCTTGGCCTCCT-3′
M24635.1
M24635.1
This study
M24635.1
M24635.1
Zb.Fish. 18S.rRNA (+)
Zb.Fish. 18S.rRNA (−)
18s rRNA
18s rRNA
-
-
Primer
Primer
5′-GTGGAGCGATTTGTCTGGTT-3′
5′-TTATGACCTGCGCTTACTGG-3′
FJ915075.1
FJ915075.1