TABLE 3.
Nucleotide sequences of various rstR genes of V. cholerae O1 and O139 isolates from Matlab, Bangladesh, in comparison with corresponding sequences in GenBank
| Strain (gene) | Serogroup | GenBank accession no. | Mutation comparison (accession no.) |
|---|---|---|---|
| MJ1347 (rstR1) | O1 | AY704650 | Identical to the V. cholerae 569B repressor rstR (AF055890) |
| MJ1347 (rstR2) | O1 | AY704651 | Silent substitution of C to T at position 1938 compared to the V. cholerae O1 biovar El Tor N16961 transcriptional repressor rstR (AE004224) |
| MM1079 (rstR2) | O1 | AY704652 | Silent substitution of C to T at position 1938 compared to the V. cholerae O1 biovar El Tor N16961 transcriptional repressor rstR (AE004224) |
| MM2071 (rstR2) | O1 | AY704653 | Silent substitution of C to T at position 1938 compared to the V. cholerae O1 biovar El Tor N16961 transcriptional repressor rstR (AE004224) |
| MM2071 (rstR4) | O1 | AY704654 | Silent substitution of A to G at position 375 and C to T at position 452 compared to the Vibrio phage CTX RSTR (rstR) (AY145127) |
| MP1950 (rstR1) | O139 | AY704655 | Identical to the V. cholerae 569B repressor rstR (AF055890) |
| MP1950 (rstR2) | O139 | AY704656 | Silent substitution of C to T at position 1938 compared to the V. cholerae O1 biovar El Tor N16961 transcriptional repressor rstR (AE004224) |
| MP1950 (rstR3) | O139 | AY704657 | Identical to the Vibrio phage CTXφ Calcutta rstR (AF133310) |
| MP2044 (rstR2) | O139 | AY704658 | Silent substitution of C to T at position 1938 compared to the V. cholerae O1 biovar El Tor N16961 transcriptional repressor rstR (AE004224) |
| MP2044 (rstR3) | O139 | AY704659 | Identical to the Vibrio phage CTXφ Calcutta rstR (AF133310) |