Table 3.
Families of carbohydrate-active enzymes represented in P. borealis PX4T (1), S. acidiphila DSM18658T (2), I. pallida IS1BT (3), and planctomycete SH-PL62 (4).
| CAZy family | 1 | 2 | 3 | 4 | CAZy family | 1 | 2 | 3 | 4 |
|---|---|---|---|---|---|---|---|---|---|
| GH1 | 0 | 1 | 0 | 0 | GH129 | 0 | 0 | 0 | 1 |
| GH2 | 1 | 2 | 0 | 1 | GH130 | 2∗ | 4 | 0 | 2 |
| GH5 | 4 | 2 | 1 | 5 | GT1 | 1 | 3 | 0 | 1 |
| GH9 | 1 | 0 | 1 | 1 | GT2 | 32 | 40 | 24 | 32 |
| GH10 | 1 | 1 | 1 | 1 | GT4 | 38∗ | 53 | 35 | 32 |
| GH13 | 9∗ | 10 | 7 | 9 | GT5 | 1 | 0 | 1 | 1 |
| GH15 | 1 | 2 | 2 | 2 | GT9 | 3 | 3 | 3 | 3 |
| GH17 | 0 | 0 | 1 | 0 | GT19 | 1 | 1 | 1 | 1 |
| GH18 | 1 | 1 | 0 | 1 | GT21 | 1 | 1 | 1 | 1 |
| GH25 | 0 | 1 | 0 | 0 | GT25 | 1 | 0 | 0 | 1 |
| GH29 | 1 | 0 | 1 | 2 | GT26 | 1 | 0 | 0 | 1 |
| GH32 | 2 | 1 | 0 | 2 | GT27 | 0 | 1 | 0 | 0 |
| GH33 | 3 | 3 | 1 | 8 | GT28 | 0 | 1 | 0 | 0 |
| GH38 | 1 | 0 | 0 | 0 | GT30 | 1 | 1 | 1 | 1 |
| GH39 | 0 | 0 | 0 | 2 | GT35 | 1 | 1 | 1 | 1 |
| GH43 | 3 | 2 | 0 | 3 | GT41 | 0 | 2 | 1 | 0 |
| GH50 | 0 | 0 | 0 | 1 | GT71 | 0 | 0 | 1 | 0 |
| GH51 | 1 | 0 | 0 | 1 | GT75 | 0 | 0 | 0 | 1 |
| GH57 | 4 | 3 | 2 | 4 | GT76 | 0 | 1 | 0 | 0 |
| GH73 | 0 | 1 | 0 | 0 | GT83 | 4 | 6 | 2 | 5 |
| GH77 | 1 | 1 | 0 | 1 | GT84 | 1 | 1 | 0 | 1 |
| GH78 | 2 | 0 | 0 | 2 | CE1 | 1 | 4 | 1 | 1 |
| GH88 | 1 | 1 | 1 | 0 | CE4 | 1 | 0 | 0 | 0 |
| GH94 | 2 | 1 | 0 | 2 | CE6 | 1 | 1 | 0 | 1 |
| GH95 | 1 | 1 | 0 | 1 | CE9 | 1 | 1 | 1 | 1 |
| GH97 | 0 | 1 | 0 | 0 | CE11 | 1 | 1 | 1 | 1 |
| GH104 | 0 | 1 | 0 | 0 | CE14 | 5 | 5 | 0 | 4 |
| GH116 | 0 | 0 | 0 | 1 | CE15 | 1 | 1 | 1 | 1 |
| GH127 | 2 | 0 | 0 | 2 | CE16 | 1 | 0 | 0 | 1 |
Data for (2–4) are given according to the CAZy database (Lombard et al., 2014).
∗Numbers indicated by asterisks include some pseudogenes (see Supplementary Tables S1, S2).