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. 2004 Dec;42(12):5644–5649. doi: 10.1128/JCM.42.12.5644-5649.2004

TABLE 3.

Dideoxyoligonucleotide primers used for P. aeruginosa MLST

Locus and function Primer sequence (5′ to 3′)
Amplicon size (bp)
Forward Reverse
acsA
    Amplification ACCTGGTGTACGCCTCGCTGAC GACATAGATGCCCTGCCCCTTGAT 842
    Sequencing GCCACACCTACATCGTCTAT GTGGACAACCTCGGCAACCT 390
aroE
    Amplification TGGGGCTATGACTGGAAACC TAACCCGGTTTTGTGATTCCTACA 825
    Sequencing ATGTCACCGTGCCGTTCAAG TGAAGGCAGTCGGTTCCTTG 495
guaA
    Amplification CGGCCTCGACGTGTGGATGA GAACGCCTGGCTGGTCTTGTGGTA 940
    Sequencing AGGTCGGTTCCTCCAAGGTC TCAAGTCGCACCACAACGTC 372
mutL
    Amplification CCAGATCGCCGCCGGTGAGGTG CAGGGTGCCATAGAGGAAGTC 940
    Sequencing AGAAGACCGAGTTCGACCAT ATGACTTCCTCTATGGCACC 441
nuoD
    Amplification ACCGCCACCCGTACTG TCTCGCCCATCTTGACCA 1,042
    Sequencing ACGGCGAGAACGAGGACTAC TTCACCTTCACCGACCGCCA 366
ppsA
    Amplification GGTCGCTCGGTCAAGGTAGTGG GGGTTCTCTTCTTCCGGCTCGTAG 989
    Sequencing GGTGACGACGGCAAGCTGTA TCCTGTGCCGAAGGCGATAC 369
trpE
    Amplification GCGGCCCAGGGTCGTGAG CCCGGCGCTTGTTGATGGTT 811
    Sequencing TTCAACTTCGGCGACTTCCA GGTGTCCATGTTGCCGTTCC 441