Table 4. Association (ka1, ka2) and dissociation (kd1, kd2) rate constants obtained for the HPA and the L1 chip using the two state model.
HPA chip | |||||||
---|---|---|---|---|---|---|---|
ka1 | kd1 | K1 | ka2 | kd2 | K2 | KA | |
DOPE/DOPG | |||||||
myxinidin | (3.55 ± 0.12)·101 | (3.19 ± 0.14)·10−2 | 1.1·103 | (8.34 ± 0.29)·10−3 | (1.63 ± 0.03)·10−3 | 5.1 | 5.61·103 |
WMR | (7.45 ± 0.01)·102 | (3.55 ± 0.17)·10−2 | 2.1·104 | (7.94 ± 0.29)·10−3 | (5.13 ± 0.12)·10−3 | 1.5 | 3.15·104 |
DOPE/DOPG/CL | |||||||
myxinidin | (6.64 ± 0.18)·102 | (1.33 ± 0.04)·10−1 | 5.0·103 | (5.92 ± 0.08)·10−3 | (1.12 ± 0.03)·10−3 | 5.3 | 2.65·104 |
WMR | (5.57 ± 0.02)·102 | (1.47 ± 0.03)·10−2 | 3.8·104 | (4.47 ± 0.05)·10−3 | (2.33 ± 0.09)·10−3 | 1.9 | 7.22·104 |
L1 chip | |||||||
DOPE/DOPG/CL | |||||||
myxinidin | (9.43 ± 0.19)·102 | (5.17 ± 0.02)·10−1 | 1.8·103 | (2.13 ± 0.09)·10−3 | (1.15 ± 0.03)·10−3 | 1.8 | 5.19·103 |
WMR | (6.98 ± 0.05)·102 | (3.53 ± 0.03)·10−1 | 2.0·103 | (2.85 ± 0.04)·10−2 | (3.25 ± 0.05)·10−4 | 88 | 1.75·105 |
The affinity constants K1 and K2 are for the first (K1 = ka1/kd1) and for the second (K2 = ka2/kd2) steps respectively, and the affinity constant (KA) determined as (ka1/kd1)·(ka2/kd2) is for the complete binding process.