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. 2016 Oct 25;8(6):10637–10649. doi: 10.18632/oncotarget.12885

Table 2. The trends of BRAF mutations prevalence of classical PTCs from individual institutions.

Country City (State) Institution
(Reference)
Prevalence of BRAF mutations in classical PTCs
Period 1 Period 2 Period 3 Period 4 P
US San Francisco (CA) UCSF [13] 1991-1995
38/74 (51.4%) DS
1996-2000
44/103 (42.7%)
DS
2001-2005
45/51 (88.2%)
DS
<0.001
US Pittsburgh (PA) Univ. of Pittsburgh [14] 1974-1985
31/62 (50.0%)
FMCA
1990-1992
16/22 (72.7%)
FMCA
2000
17/24 (70.8%)
FMCA
2009
50/65 (77.0%)
FMCA
0.008 a
Italy Pisa/ Perugia/ Milan Endocrine units of Pisa, Milan and Perugia [11] 1996-2000
21/56 (37.5%)
DS
2001-2005
61/98 (62.2%)
DS
2006-2010
56/106 (52.9%)
DS
0.012
Korea Seoul Seoul St. Mary's Hospital [18, 19] 2008-2009
283/355 (79.7%)
DS
2011-2012
165/200 (82.5%)
DS
NS
Ireland Dublin St. James's Hospital [20] 1982-1992
0/3 (0%)
DS
1993-2002
11/15 (73.3%)
DS
0.043
Poland Kielce Holycross Cancer Center [21] 2000-2004
88/152 (57.9%)
Three methods b
2005 – 2009
140/195 (71.8%)
Three methods b
2010 – 2013
189/254 (74.4%)
Three methods b
0.001 a

Abbreviations: NS, not significant; DS, direct sequencing; FMCA, fluorescent melting curve analysis

a P value for trend adjusted for age and sex

b All analyses that were performed prior to 2013 by DS and allele-specific PCR (AS-PCR) were verified by quantitative Real time PCR (qPCR). In total, the authors used qPCR to analyze BRAF mutations in 705/723 PTCs (97.5%). The majority of samples were tested using the three methods (DS, AS-PCR and qPCR).