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. 2016 Dec 10;8(3):5069–5080. doi: 10.18632/oncotarget.13847

Table 1. The significantly different copy numbers of thirty nine genes in metastasis and non-metastasis groups.

Gene name Position Average CN P value Non-metastasis Metastasis
Average CN Amplification Deletion Average CN Amplification Deletion
TPM3 Chr1:154117779-154165725 2.32 0.021 2.16 8 (0.42) 0 (0) 2.49 13 (0.68) 0 (0)
MUC1 Chr1:155148299-155172706 2.28 0.023 2.14 8 (0.42) 1 (0.05) 2.42 13 (0.68) 0 (0)
RAB25 Chr1:156020966-156050295 2.31 0.029 2.16 8 (0.42) 1 (0.05) 2.46 13 (0.68) 0 (0)
SDHC Chr1:161274165-161344535 2.35 0.021 2.17 8 (0.42) 0 (0) 2.53 14 (0.74) 0 (0)
FCGR2B Chr1:161622904-161658444 2.34 0.022 2.17 8 (0.42) 0 (0) 2.51 14 (0.74) 0 (0)
PBX1 Chr1:164518596-164831060 2.32 0.049 2.17 8 (0.42) 0 (0) 2.46 13 (0.68) 0 (0)
PRRX1 Chr1:170623312-170718541 2.30 0.023 2.14 7 (0.37) 0 (0) 2.46 13 (0.68) 0 (0)
TNN Chr1:175026993-175127202 2.30 0.023 2.14 7 (0.37) 0 (0) 2.46 13 (0.68) 0 (0)
RFWD2 Chr1:175903966-176186370 2.28 0.025 2.12 7 (0.37) 1 (0.05) 2.45 13 (0.68) 0 (0)
ABL2 Chr1:179058461-179122224 2.30 0.023 2.14 7 (0.37) 0 (0) 2.46 13 (0.68) 0 (0)
RNASEL Chr1:182532768-182568394 2.29 0.023 2.14 7 (0.37) 0 (0) 2.44 13 (0.68) 0 (0)
LAMC2 Chr1:183145173-183220406 2.29 0.023 2.14 7 (0.37) 0 (0) 2.44 13 (0.68) 0 (0)
TPR Chr1:186270785-186354457 2.28 0.045 2.14 7 (0.37) 0 (0) 2.42 12 (0.63) 0 (0)
PTGS2 Chr1:186630943-186659559 2.30 0.034 2.14 7 (0.37) 0 (0) 2.46 12 (0.63) 0 (0)
TGFB2 Chr1:218508675-218627961 2.28 0.045 2.14 7 (0.37) 0 (0) 2.42 12 (0.63) 0 (0)
CDC42BPA Chr1:227167565-227515826 2.30 0.043 2.16 6 (0.32) 0 (0) 2.44 12 (0.63) 0 (0)
OBSCN Chr1:228385860-228558951 2.30 0.043 2.16 6 (0.32) 0 (0) 2.44 12 (0.63) 0 (0)
RHOU Chr1:228770393-228892416 2.30 0.043 2.16 6 (0.32) 0 (0) 2.44 12 (0.63) 0 (0)
AKT3 Chr1:243641534-244016584 2.26 0.047 2.14 6 (0.32) 0 (0) 2.39 12 (0.63) 0 (0)
NCOA1 Chr2:24797345-25003570 2.23 0.036 2.10 5 (0.26) 1 (0.05) 2.35 11 (0.58) 0 (0)
DNMT3A Chr2:25445829-25485184 2.23 0.036 2.10 5 (0.26) 1 (0.05) 2.35 11 (0.58) 0 (0)
ALK Chr2:29405639-30154477 2.25 0.024 2.12 5 (0.26) 0 (0) 2.37 12 (0.63) 0 (0)
MRAS Chr3:138056489-138134377 2.61 0.029 2.37 13 (0.68) 0 (0) 2.86 16 (0.84) 0 (0)
PIK3CB Chr3:138361539-138436463 2.62 0.029 2.37 13 (0.68) 0 (0) 2.88 16 (0.84) 0 (0)
FOXL2 Chr3:138653065-138675982 2.62 0.043 2.39 13 (0.68) 0 (0) 2.86 16 (0.84) 0 (0)
GMPS Chr3:155578324-155665520 2.74 0.042 2.51 15 (0.79) 0 (0) 2.96 18 (0.95) 0 (0)
CCNL1 Chr3:156855585-156888482 2.75 0.032 2.51 15 (0.79) 0 (0) 2.98 18 (0.95) 0 (0)
LMO2 Chr11:33870122-33901371 2.15 0.031 2.05 2 (0.11) 4 (0.21) 2.25 9 (0.47) 2 (0.11)
FGF4 Chr11:69577796-69600171 5.14 0.045 3.15 11 (0.58) 0 (0) 7.12 13 (0.68) 0 (0)
ZBTB16 Chr11:113920430-114131397 1.90 0.049 1.97 2 (0.11) 4 (0.21) 1.83 1 (0.05) 10 (0.53)
PAFAH1B2 Chr11:117004999-117051761 1.90 0.049 1.97 2 (0.11) 4 (0.21) 1.83 1 (0.05) 10 (0.53)
PCSK7 Chr11:117065787-117112811 1.90 0.049 1.97 2 (0.11) 4 (0.21) 1.83 1 (0.05) 10 (0.53)
H2AFX Chr11:118954584-118976177 1.89 0.041 1.95 2 (0.11) 4 (0.21) 1.83 1 (0.05) 11 (0.58)
CHEK1 Chr11:125485030-125537042 1.91 0.017 2.00 3 (0.16) 3 (0.16) 1.83 1 (0.05) 10 (0.53)
CCNB1IP1 Chr14:20769528-20807533 2.36 0.039 2.14 6 (0.32) 2 (0.11) 2.58 12 (0.63) 1 (0.05)
TRA@ Chr14:22080057-23031075 2.29 0.040 2.13 6 (0.32) 3 (0.16) 2.45 12 (0.63) 1 (0.05)
CTDP1 Chr18:77429800-77524510 1.91 0.041 1.98 2 (0.11) 3 (0.16) 1.84 2 (0.11) 11 (0.58)
OLIG2 Chr21:34388215-34411503 1.94 0.036 2.04 4 (0.21) 3 (0.16) 1.84 0 (0) 7 (0.37)
ITSN1 Chr21:35004783-35220802 1.94 0.030 2.03 4 (0.21) 3 (0.16) 1.85 0 (0) 7 (0.37)