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. 2016 Nov 24;8(7):12517–12532. doi: 10.18632/oncotarget.13573

Table 1. A summary of lncRNAs involved in colorectal cancer development and progression.

LncRNA In colorectal cancer, its expressions is: Functions Reference
Colon Cancer Associated Transcript 1 (CCAT1) Upregulated Promotes cellular proliferation, migration, and invasion. [6]
Plasmacytoma variant translocation 1(PVT-1) Upregulated Promotes proliferation and invasion. Knockdown of PVT-1 promotes apoptosis in colorectal cancer cell lines by activating the TGF-β signaling pathway. [7]
Colorectal Neoplasia Differentially Expressed (CRNDE) Upregulated Promotes colon cancer cell proliferation. [8, 9, 10]
Metastasis Associated Lung Adenocarcinoma Transcript 1 (MALAT1) Upregulated Promotes cellular proliferation, migration, and invasion via 1) binding to SFPQ and releasing oncogene PTBP2 from SFPQ/PTBP2 complex 2) increasing expression of AKAP-9 via promoting SRPK1-catalyzed SRSF1 phosphorylation in colorectal cancer cells. [11, 12, 13]
ZNFX1 antisense RNA 1 (ZFAS1) Upregulated Silencing of ZFAS1 decreases CRC cell proliferation via G1-arrest of the cell cycle and decreasing CRC tumorigenicity. ZFAS1 acts as an oncogene in CRC via 1) destabilization of p53; 2) interaction with CDK1/cyclin B1 complex leading to cell cycle progression and suppression of apoptosis. [14, 15, 16, 17]
MYC-induced lncRNAs (MYCLo-1, MYCLo-2, MYCLo-3) Upregulated Promotes MYC-modulated cell proliferation. MYCLo-1/−2 promote G1/S transition. MYCLo-3 decreases cellular time spent in the S and G2 phases. [18]
MYC-repressed lncRNAs (MYCLo-4, MYCLo-5, MYCLo-6) Downregulated Inhibits MYC-enhanced cell proliferation. MYCLo-4/−6 increase G2 arrest. MYCLo-5 decreases cellular populations in the S phase. [19]
Antisense noncoding RNA in the INK4 locus (ANRIL) Upregulated Promotes proliferation in a p15/p16-pRB pathway-independent manner, and promotes cell invasion and migration. [20, 61]
urothelial carcinoma-associated 1 (UCA1) Upregulated Activates proliferation, suppresses apoptosis and cell cycle progression of CRC cells. UCA1 induces CRC migration and invasion and predicts poor prognosis. [21, 22, 23]
BRAF-activated lncRNA (BANCR) Downregulated Inhibits the proliferation in part through upregulation of p21, induces the epithelial-mesenchymal transition (EMT) through an MEK/extracellular signal-regulated kinase-dependent mechanism. [24, 33]
Maternally expressed gene 3 (MEG3) Downregulated Inhibits CRC cell proliferation and is an independent predictor for overall survival. [25]
LncRNA loc285194 Downregulated Suppresses tumor cell growth due to specific suppression of miR-211. Low expression of LOC285194 is associated with larger tumor size, higher tumor stage, more distant metastasis and poorer disease free survival. [26, 27, 28]
Loc554202 Downregulated Suppresses the cell proliferation, induces apoptosis, partly through activating specific caspase cleavage cascades, and inhibits CRC tumorigenesis. [32]
LncRNA H19 Upregulated Promotes EMT in CRC. [34]
Hox transcript antisense intergenic RNA (HOTAIR) Upregulated Indicates poorer prognosis, promotes migration and invasion, enhances CSC properties, promotes cellular proliferation, decreases the expression of E-cadherin and increases expression of vimentin and MMP9. [36, 49]
HOTTIP(‘HOXA transcript at the distal tip’ ) Upregulated Predicts unfavorable prognosis for CRC patients. [37]
Taurine up-regulated gene 1 (TUG1) Upregulated Increases the invasive and metastatic ability of CRC cells through activating EMT process and TUG1 overexpression indicates poor survival rates and a higher risk for cancer metastasis. [38]
FEZF1 antisense RNA1 (FEZF1-AS1) Upregulated Promotes migration and proliferation through activating the G1-S checkpoint [39]
Cancer susceptibility candidate 11 (CASC11) Upregulated Promotes CRC cell proliferation and metastasis by activation of WNT/β-catenin signaling. [40]
91H Upregulated Promotes the proliferation, migration, and invasiveness of CRC cells. [41]
LncRNA-CTD903 Downregulated Predicts favorable prognosis in CRC patients and suppresses invasion and migration through repressing Wnt/β-catenin signaling. [42]
LncRNA TINCR Downregulated Suppresses CRC proliferation and metastasis by accelerating the cleavage of EpCAM and releases EpICD via activating WNT/β- catenin pathway. [43]
ncRAN Downregulated Inhibits in vitro migration and invasion of CRC cells and predicts CRC patient outcome. [44]
Colon cancer-associated transcript 2 (CCAT2) Upregulated Promotes tumor growth, metastasis, and chromosomal instability. It functions as a WNT downstream target. [46]
LncRNA-HIF2PUT Upregulated Promotes the HIF-2α expression and the CSC properties. [48]
Lnc34a(locus mainly in the nucleus) Upregulated Enhances CSC self-renewal and tumorigenesis and suppresses miR-34a expression. [50]
LincRNA-p21 Downregulated Attenuates the viability, self-renewal, and glycolysis of CSCs. [51]
LncRNA DANCR Upregulated Serves as a potential prognosis predictor for CRC prognosis, associates with TNM stage, histologic grade, and lymph node metastasis, and predicts shorter overall survival and disease-free survival time. [52]
LncRNA FTX Upregulated Serves as an independent prognostic factor for CRC patients and is associated with differentiation grade, lymph vascular invasion, and clinical stage; indicates poorer overall survival. [53]
Prostate cancer associated transcript 1(PCAT-1) Upregulated Functions as an independent prognostic factor for CRC patient outcome and implicates poorer overall survival. [54, 55]
RP11-462C24.1 Downregulated Serves as a prognosis indicator for CRC patients. Its down-regulation indicates increased distant metastasis and a poor disease-free survival. [56]
PRNCR1 Upregulated Serves as a sensitive diagnostic biomarker of CRC. [57]
NEAT1 Upregulated Functions as s diagnostic and prognostic biomarker of overall survival in CRC, associates with tumor differentiation, invasion, metastasis and TNM stage and predicts shorter disease-free survival time and overall survival time. [58, 59]