Table 2.
Sample name | Raw reads (paired end) | Base (Gb) | GC (%) | % of data ≥ Q30 | Raw read length (bp) |
---|---|---|---|---|---|
A) Fastq File Summary: | |||||
REMSD | 15,673,204 | 3.1 | 49.67 | 90.6 | 100 x 2 |
Free Mov | 29,657,987 | 5.9 | 48.8 | 88.4 | 100 x 2 |
B) Read alignment summary: | |||||
Sample name | Total reads | Aligned read count | Aligned % | ||
REMSD | 31,346,408 | 25,591,827 | 91.36 | ||
Free Mov | 59,315,974 | 45,404,529 | 91.68 |
(A) Fastq file summary after RNA seq data generation, about 90% data passes Phred score ≥ Q30 and (B) read alignment results after data analysis, around 91% of data aligned to Rattus norvegicus genome for both REMSD and Free moving control (Free Mov).