Table 2.
Derived Parameters for Increasing kn from Least-Squares Fitting to Eq. 2, and from ODE/ABC Analysis
Derived Parameter | Base | kn × 2 | kn × 5 | kn × 10 | |
---|---|---|---|---|---|
N-E-F | log(kn/k−) | −2.43 ± 0.02 | −2.15 ± 0.02 | −1.78 ± 0.01 | −1.49 ± 0.01 |
log(k+k−) | −9.104 ± 0.006 | −9.108 ± 0.006 | −9.116 ± 0.006 | −9.127 ± 0.006 | |
ODE | log(kn/kf) | −3.09 ± 0.03 [−3.00] | −2.78 ± 0.03 [−2.70] | −2.59 ± 0.05 [−2.30] | −2.06 ± 0.02 [−2.00] |
log(ke1kf) | −8.98 ± 0.01 [−9.00] | −8.98 ± 0.01 [−9.00] | −8.91 ± 0.02 [−9.00] | −8.97 ± 0.01 [−9.00] | |
log(kf) | −8.98 ± 0.01 [−9.00] | −8.98 ± 0.01 [−9.00] | −8.91 ± 0.02 [−9.00] | −8.98 ± 0.01 [−9.00] | |
log(ke1kn) | −12.07 ± 0.02 [−12.00] | −11.76 ± 0.02 [−11.70] | −11.50 ± 0.03 [−11.30] | −11.04 ± 0.01 [−11.00] | |
log(kn) | −12.07 ± 0.02 [−12.00] | −11.76 ± 0.02 [−11.70] | −11.50 ± 0.03 [−11.30] | −11.04 ± 0.01 [−11.00] | |
log(ke1/) | −0.0003 ± 0.002 [0] | −0.001 ± 0.001 [0] | −0.002 ± 0.002 [0] | 0.001 ± 0.001 [0] |
Reported errors indicate standard errors of fitting for N-E-F parameters, and mean ± SE of the derived parameter posterior distributions for ODE (n = 100). Also for ODE, italicized values in brackets indicate the expected value of the derived parameter used to generate a synthetic timecourse.