Table 4. KEGG enrichment of dysregulated DEGs in RA.
KEGG ID | KEGG terms | FDR | Genes |
---|---|---|---|
hsa04360 | Axon guidance | 0.010565 | DCC, SEMA6A, SEMA4D, PLXNA2, RGS3, NFAT5, CDK5, UNC5C |
hsa03013 | RNA transport | 0.015948 | EIF5B, SAP18, GEMIN4, PABPC1, THOC2, EIF1B, EIF3E |
hsa00982 | Drug metabolism - cytochrome P450 | 0.017355 | ALDH1A3, CYP1A2, CYP3A5, MGST3, UGT2B15 |
hsa00980 | Metabolism of xenobiotics by cytochrome P450 | 0.017377 | ALDH1A3, CYP1A2, CYP3A5, MGST3, UGT2B15 |
hsa05200 | Pathways in cancer | 0.018693 | PPARD, PIAS2, DCC, E2F3, PTEN, PDGFA, CSF1R, MAPK8, PIAS1, BRCA2, CEBPA |
hsa03040 | Spliceosome | 0.020842 | DHX15, HNRNPA1, DHX16, THOC2, PRPF3, HNRNPU, SRSF5 |
hsa04910 | Insulin signaling pathway | 0.021514 | RPS6KB1, MAPK8, MKNK2, TSC1, PHKA1, PRKAG1, PPP1CB |
hsa05016 | Huntington’s disease | 0.021575 | POLR2J, NDUFA2, UQCRC1, TGM2, BBC3, NDUFA7, GRIN1, ATP5O |
hsa05010 | Alzheimer’s disease | 0.023516 | NDUFA2, UQCRC1, CAPN2, NDUFA7, GRIN1, ATP5O, CDK5 |
hsa04141 | Protein processing in endoplasmic reticulum | 0.024488 | SEC63, P4HB, SAR1A, CAPN2, MAPK8, AMFR, HERPUD1 |
hsa03060 | Protein export | 0.02558 | SRP54, SEC63, SEC11A |
hsa04010 | MAPK signaling pathway | 0.026502 | MAPK8IP2, PDGFA, RRAS, MAPK8, MAP3K11, MKNK2, DUSP3, STK3, CACNB2, MAP3K8 |
hsa03440 | Homologous recombination | 0.031046 | RPA2, RPA3, BRCA2 |
hsa05160 | Hepatitis C | 0.033309 | PIAS2, MAPK8, PIAS1, IFNA21, IRF9, EIF3E |
Notes.
TITLE
- DEGs
- differentially expressed genes
- FDR
- false discovery rate
- RA
- rheumatoid arthritis