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. 2004 Dec 1;32(21):6304–6311. doi: 10.1093/nar/gkh971

Figure 2.

Figure 2

(A) Rmsd time course of RNA heavy atoms (with respect to start structure) during the data gathering phase of the 5′-rCGUUACG/5′-rCGUAACG duplex simulation (black line). (B) Rmsd time course of the duplex simulation with central F:A base pair (black line). For comparison, the Rmsd time course of the 5′-rCGCUGCG/5′-rCGCAGCG duplex simulation is shown as grey dashed line (in A and B).