Table IV.
Pathogenicity islands homologous to a region in the genomic sequence of A. baumannii MDR-SHH02.
| Gene ID | Start | End | Size (bp) | no. of ORFs | PAIs homologous to this region |
|---|---|---|---|---|---|
| MDRSHH02000806 | 332 | 21071 | 20740 | 18 | PAPI-1 (Pseudomonas aeruginosa PA14) |
| PAGI-2(C) (Pseudomonas aeruginosa C) | |||||
| PAGI-3(SG) (Pseudomonas aeruginosa SG17M) | |||||
| PAGI-5 (Pseudomonas aeruginosa PSE9) | |||||
| PPHGI-1 (Pseudomonas syringae pv. phaseolicola 1302A) | |||||
| SPI-7 (Salmonella enterica subsp. enterica serovar Typhi str. CT18) | |||||
| SPI-7 (Salmonella enterica subsp. enterica serovar Typhi Ty2) | |||||
| AbaR25 (Acinetobacter baumannii BJAB07104) | |||||
| AbaR26 (Acinetobacter baumannii BJAB0868) | |||||
| Hrp PAI (Erwinia amylovora 321) | |||||
| S-PAI (Pseudomonas cichorii 83-1) | |||||
| Hrp PAI (Pseudomonas syringae pv. tomato DC3000) | |||||
| Hrp PAI (Pseudomonas syringae pv. tomato str. DC3000) | |||||
| T-PAI (Pseudomonas viridiflava LP23.1a) | |||||
| T-PAI (Pseudomonas viridiflava PNA3.3a) | |||||
| S-PAI (Pseudomonas viridiflava RMX23.1a) | |||||
| S-PAI (Pseudomonas viridiflava ME3.1b) | |||||
| S-PAI (Pseudomonas viridiflava RMX3.1b) | |||||
| Not named (Corynebacterium urealyticum DSM 7109) | |||||
| LEE (Citrobacter rodentium DBS100) | |||||
| PAI I 536 (Escherichia coli 536) | |||||
| LEE (Escherichia coli E2348/69) | |||||
| LEE (Escherichia coli O157:H7 str. EDL933 ATCC43895) | |||||
| LEE (Escherichia coli 71074) | |||||
| LEE (Escherichia coli 83/39) | |||||
| LEE (Escherichia coli REPEC 84/110-1) | |||||
| LEE (Escherichia coli RW1374) | |||||
| LEE (Escherichia coli RDEC-1) | |||||
| LEE (Escherichia coli O157:H7 EDL933) | |||||
| LEE (Escherichia coli O157:H7 str. Sakai) | |||||
| LEE (Escherichia coli O103:H2 str. 12009) | |||||
| LEE (Escherichia coli O26:H11 str. 11368) | |||||
| LEE (Escherichia coli O111:H-str. 11128) | |||||
| LEE II (Escherichia coli 413/89-1) | |||||
| AGI-3 (Escherichia coli BEN2908) | |||||
| TAI (Escherichia coli O157:H7 EDL933) | |||||
| OI-122 (Escherichia coli O157:H7 EDL933) | |||||
| PAI I CFT073 (Escherichia coli CFT073) | |||||
| Not named (Escherichia coli UMN026) | |||||
| SESS LEE (Salmonella enterica subsp. salamae serovar Sofia S1296) | |||||
| SESS LEE (Salmonella enterica subsp. salamae serovar Sofia S1635) | |||||
| SHI-1 (Shigella flexneri 2a str. 301) | |||||
| SHI-1 (Shigella flexneri 2a str. 2457T) | |||||
| SRL (Shigella flexneri 2a YSH6000) | |||||
| Not named (Yersinia pestis CO92) |
A. baumannii, Acinetobacter baumannii; ORF, open reading frame; PAIs, pathogenicity islands.