Table 1. Overview of isolates included in this study.
See text for details.
| Source | n | Country | Source of genome sequence |
|---|---|---|---|
| Dataset one | |||
| ST-45 CC | |||
| Human | 144 | UK | PubMLST |
| 36 | Finland | Kovanen et al. (2014b) | |
| Animal | 42 | UK | PubMLST |
| 95 | Finland | Llarena et al. (2015a), Zhang et al. (2015), This study | |
| 3 | Estonia | This study | |
| 2 | Lithuania | This study | |
| Environment | 5 | Finland | Kovanen et al. (2016) |
| Unknown | 13 | UK | PubMLST |
| ST-21 CC (outgroup) | |||
| Animal | 1 | Estonia | This study |
| Dataset two | |||
| ST-45 | |||
| Human | 31 | Canada | Public Health Agency of Canada |
| Animal | 8 | Italy | Italian surveillance study |
| 40 | Canada | Public Health Agency of Canada | |
| 6* | Finland | This study | |
| Environment | 11 | Canada | Public Health Agency of Canada |
*Migratory barnacle geese.