TABLE 5.
Organism by GH family | Protein IDa | Putative functionb | No. of unique peptides at distance (mm)c: |
||
---|---|---|---|---|---|
0–5 | 10–15 | 20–25 | |||
GH5 | |||||
S. lacrymans | |||||
433208 | Endo-β-1,4-glucanase | 0 | 2 | 4 | |
480589 | Endo-β-1,4-mannosidase | 1 | 1 | 3 | |
412480 | Exo-β-1,3-glucanase | 1 | 2 | 0 | |
G. trabeum | |||||
63180 | Endo-β-1,4-glucanase | 6 | 14 | 45 | |
120257 | Endo-β-1,4-glucanase | 2 | 4 | 2 | |
110405 | Endo-β-1,4-mannanase | 3 | 7 | 10 | |
118009 | Endo-β-1,4-mannosidase | 2 | 2 | 0 | |
68070 | Exo-β-1,3-glucanase | 2 | 0 | 0 | |
59826 | Exo-β-1,3-glucanase | 9 | 9 | 7 | |
42111 | Exo-β-1,3-glucanase | 2 | 4 | 4 | |
41779 | Exo-β-1,3-glucanase | 1 | 4 | 3 | |
135369 | β-1,4-Mannanase | 3 | 8 | 6 | |
114574 | β-Mannanase | 1 | 3 | 3 | |
GH10 | |||||
S. lacrymans | |||||
349170 | Endo-β-1,4-xylanase | 3 | 6 | 4 | |
G. trabeum | |||||
107452 | Endo-β-1,4-xylanase | 15 | 36 | 49 | |
138785 | Endo-β-1,4-xylanase | 3 | 7 | 5 | |
122601 | Endo-β-1,4-xylanase | 6 | 1 | 0 | |
149061 | Endo-β-1,4-xylanase | 3 | 0 | 0 |
Protein identification (ID) numbers from the Department of Energy (DOE) Joint Genome Institute (JGI) MycoCosm database (28).
Putative functions determined by BLAST searches of Swiss-Prot database (27).
The number of unique peptides for each protein is listed for each wafer section pool (mm from the hyphal front).