Table 4.
Allele frequencies after IVM treatment for T. circumcincta SNPs 167 and 198/200, and T. colubriformis SNP 198/200, and morphological identification
Farm | % Egg reduction | R/S classification |
T. colubriformis | T. circumcincta | % L3 species | ||||
---|---|---|---|---|---|---|---|---|---|
% SNP200 | % SNP198 | % SNP200 | % SNP198 | % SNP167 | Tc | Tri | |||
1 | 37.3 | R | 23.3 | 6.4 | 0 | 0 | 0 | 63 | 37 |
2 | 100 | S | 97.3 | 0 | 0 | 0 | 0 | 54 | 46 |
3 | 86.0 | R | 79.2 | 14 | 0 | 0 | 2.4 | 41 | 59 |
4 | −11.9 | R | 94.7 | 0 | 0 | 0 | 0 | 60 | 40 |
5 | 99.3 | S | 93.7 | 1 | - | - | 0 | 50 | 50 |
6 | 100 | S | - | - | 0 | 0 | 3 | 54 | 46 |
7 | 95.9 | S | 100 | 14 | 0 | 0 | 0 | 70 | 30 |
8 | 100 | S | 89.9 | 6.1 | - | - | 0 | - | - |
9 | 93.5 | Borderline | 95 | 2.4 | 0 | 0 | 6.1 | 44 | 56 |
Tc: T. circumcincta and Tri: Trichostrongylus spp. -: Failed samples