Table 1.
Genes used as conservative markers of the two distinctive Exiguobacterium groups by Vishnivetskaya et al. (2009).
| Function | Gene ID∗ | Genes | Detectable homologous |
|||
|---|---|---|---|---|---|---|
|
Vishnivetskaya et al., 2009 |
This work |
|||||
| Group I | Group II | Group I | Group II | |||
| Replication and repair | Exig_0006 | gyrA | + | - | + | + |
| Exig_0005 | gyrB | + | + | + | + | |
| Exig_2932 | srmB/csh | + | - | + | + | |
| Exig_3033 | dnaB | + | - | + | + | |
| Transcription | Exig_2463 | flgM | + | - | + | - |
| Exig_0137 | Anti-sigma factor | + | - | + | + | |
| Exig_0136 | rpoE | + | - | + | + | |
| Translation and biogenesis | Exig_0119 | infA | + | + | + | + |
| Exig_1837 | infB | + | + | + | + | |
| Exig_0047 | RNA-binding S4 | + | - | + | + | |
| Exig_2427 | Sigma54 S30EA | + | + | + | + | |
| Posttranslational modification, | Exig_2147 | tig | + | - | + | + |
| chaperones | Exig_0781 | dnaK | + | + | + | + |
| Exig_2768 | groL | + | + | + | + | |
| Signal transduction | Exig_0364 | uspA | + | - | + | + |
| Lipid metabolism | Exig_2596 | desA | + | + | + | + |
∗Gene IDs are given as defined in http://genome.ornl.gov/microbial/exig/.