Skip to main content
. 2017 Mar 22;8:391. doi: 10.3389/fpls.2017.00391

Table 2.

List of primers used in this study.

DNA region Primer names Sequence 5′–3′ Reference Thermocycling protocol
ITS 18S-1830F
26S-25R
5′-AACAAGGTTTCCGTAGGTGA-3′
5′-TATGCTTAAAYTCAGCGGGT-3′
Nickrent et al., 1994 Activation of the polymerase at 95°C for 3 min followed by 35 cycles of denaturation at 95°C for 30 s, annealing at 57°C for 20 s, extension at 72°C for 45 s, and a final extension at 72°C for 7 min
trnL-F cF
fR
5′-CGAAATCGGTAGACGCTACTACG-3′
5′-ATTTGAACTGGTGACACGAG-3′
Taberlet et al., 1991 Activation of the polymerase at 94°C for 3 min followed by 35 cycles of denaturation at 94°C for 1 min, annealing at 50°C for 1 min, extension at 72°C for 1 min, and a final extension at 72°C for 7 min
rps16 rpsF
rpsR2
5′-GTGGTAGAAAGCAACGTGCGACTT-3′
5′-TCGGGATCGAACATCAATTGCAAC-3′
Oxelman et al., 1997 Activation of the polymerase at 95°C for 3 min followed by 35 cycles of denaturation at 95°C for 30 s, annealing at 55°C for 30 s, extension at 72°C for 45 s, and a final extension at 72°C for 7 min
trnK-matK-trnK matK1198f 5′-CTGTGTTAGATATACNAATACCCC-3′ Andersson and Antonelli, 2005 Activation of the polymerase at 94°C for 4 min followed by 35 cycles of denaturation at 94°C for 1 min, annealing at 50°C for 1 min, extension at 72°C for 2.5 min, and a final extension at 72°C for 7 min
matk2053r 5′-TTAGCRCAAGAYAGTCGAAGTA-3′
ndhF 1320f 5′GGGATTAACYGCATTTTATATGTTTCG-3′ Rydin et al., 2008 Activation of the polymerase at 95°C for 3 min followed by 35 cycles of denaturation at 95°C for 1 min, annealing at 50°C for 1 min, extension at 72°C for 1 min, and a final extension at 72°C for 7 min
ndhF 1000r 5′-CCTAGAGCTAGCATCATATAACCC-3′