TABLE 1.
Metadata and 1D sequencing run performance for the Antarctic tests
Sample | Description | Sequencing date | Ambient T | Conditions | Sequencing location | Total # reads | Pass/fail ratio | Longest pass read, bp | Mean pass read length, bp | Median pass read length, bp | Mean Q score | Duration of run |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Control | lambda Phage DNA | Nov. 23, 2016 | RT | S. S. Johnson lab | Georgetown University | 6100 | 0.761 | 79,414 | 7763 | 4910 | 8.1 | 3 h |
Control | lambda Phage DNA | Feb. 24, 2017 | 4°C | S. S. Johnson lab | Georgetown University | 4525 | 0.021 | 15,922 | 3764 | 2178 | 8.1 | 50 min |
Calibration | Configuration cell | Dec. 10, 2016 | −5°C | Light snow, overcast | Hut Point | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
Environmental | Paleomat, Lake Fryxell | Dec. 15, 2016 | RT | Crary lab | McMurdo Station | 46,936 | 0.121 | 90,183 | 562 | 301 | 5.7 | 10 h |
Environmental | Modern mat, Lake Vida | Dec. 17, 2016 | RT | Crary lab | McMurdo Station | 18,761 | 0.272 | 171,106 | 3874 | 2067 | 7.8 | 8 h |
Environmental | Paleomat, Lake Vanda | Dec. 19, 2016 | −1°C | Sunny, slight wind | Taylor Valley | 6026 | 0.035 | 22,128 | 777 | 484 | 5.1 | 50 mina |
Environmental | Paleomat, Lake Vida | Dec. 20, 2016 | 2°C | Sunny | Taylor Valley | 573 | 0.139 | 21,357 | 3449 | 1238 | 4.6 | 2.5 h |
Run terminated for evacuation in advance of impeding weather.