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. 2017 Jan 12;8(9):14374–14394. doi: 10.18632/oncotarget.14605

Table 5. Prosate Cancer Databases for external validation of selected proteins.

Database Samples Clinical Data Details Matching Genes (LG) CI (LG) Survival ROC (LG) Matching Genes (AS) CI (AS) Survival ROC (AS)
Taylor MSKCC Prostate 140 Recurrence, Gleason, Stage Concordant assessment of DNA copy number, mRNA expression, and focused exon resequencing in 218 prostate cancer tumors 31/31 82.27 0.85 36/36 83.17 0.82
Galsky Oh - Prostate - GSE45705 61 Survival qPCR profiling of whole blood from patients with castration-resistant prostate cancer 2/31 52.92 0.44 1/36 53.86 0.65
Sboner Rubin Prostate GSE16560 281 Gleason cDNA-mediated gene expression profiling on formalin-fixed paraffin-embedded transurethral resection of prostate (TURP) samples 22/31 67.49 0.78 31/36 63.39 0.67
Gulzar-Prostate-GSE40272 98 Recurrence Gene-expression profiling of prostate tumors 31/31 80.90 0.93 36/36 79.34 0.82
Kollmeyer-Jenkins Prostate GSE10645-GPL5858 596 Survival, Age, PSA, Stage, Grade Gene expression microarray of tumors using RNA from archival FFPE tissue 2/31 55.89 7/36 69.92 0.76
PRAD - TCGA - Prostate adenocarcinoma June 2016 497 Survival Gene-expression profiling of prostate tumors 31/31 95.08 0.87 36/36 95.65 0.88

LG = Low Glucose; CI = Concordance index; ROC = Receiver operating characteristic; AS = Androgen Sensitivity