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. 2017 Mar 23;12(3):e0174274. doi: 10.1371/journal.pone.0174274

Table 2. Frequencies and statistical analysis of variant NEPH3-p.V353M in the various hematuric sub-cohorts, based on disease severity.

Genotype counts Genotype frequency Allele counts Allele frequency Statistics
Cohort N VV VM MM VV VM MM V M V M “Mild” v. “Severe”a “Mild” v. “Severe”b Odds Ratio (Dominant model)
General population 462 437 25 0 0.946 0.054 0 899 25 0.973 0.027
ExAC Browser 54373 52712 1595 61 0.969 0.029 0.002 105434 3312 0.969 0.031
Mild
A 44 44 0 0 1.0 0 0 88 0 1.0 0
B 35 35 0 0 1.0 0 0 70 0 1.0 0
C 22 22 0 0 1.0 0 0 44 0 1.0 0
D 122 119 3 0 0.975 0.025 0 241 3 0.988 0.012
Total 223 220 3 0 0.987 0.013 0 443 3 0.993 0.007
Severe
A 59 53 6 0 0.898 0.102 0 112 6 0.949 0.051 c3.6x10-2
B 34 32 2 0 0.941 0.059 0 66 2 0.971 0.029
C 12 10 2 0 0.833 0.167 0 22 2 0.917 0.083
D 196 181 14 1 0.923 0.071 0.006 376 16 0.959 0.041
Total 301 276 24 1 0.917 0.080 0.003 576 26 0.957 0.043 c3.0x10-4 c2.0x10-4 6.64 (1.98, 22.29)
d3.0x10-3 e4.2x10-3 d6.63 (1.94, 22.68)

The four sub-cohorts presented here comprise the larger HEMATURIA cohort. Description of sub-cohorts can be found in Table 1.

a Genotypic association analysis p-values (dominant model);

b Allelic association analysis p-values;

c Fisher’s Exact Test (2-sided);

d Adjusted for gender and age;

e Adjusted for patients’ kinships