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. 2017 Mar 24;7:45229. doi: 10.1038/srep45229

Table 3. Non-covalent interactions of complexes 1 and 2 with the Human–DNA–Topo–I.

Name Distance (Å) Category Type
D:Complex 1:H - B:DT10:O2 2.89 Hydrogen Bond Conventional
B:DT10 - D: Complex 1 4.26   Pi-Pi T-shaped
C:DG12 - D: Complex 1 4.96   Pi-Pi T-shaped
D:DA113 - D: Complex 1 5.20   Pi-Pi T-shaped
D:Complex 1:C - A:LEU721 5.43   Alkyl
B:DT10 - D: Complex 1:C 5.48 Hydrophobic Pi-Alkyl
C:DG12 - D: Complex 1:C 2.70   Pi-Alkyl
C:DG12 - D: Complex 1:C 5.20   Pi-Alkyl
C:DG12 - D: Complex 1:C 3.16   Pi-Alkyl
D:DA113 - D:Complex 2 5.58   Pi-Pi Stacked
C:DG12 - D: Complex 2 4.26   Pi-Pi T-shaped
D: Complex 2 - C:DG12 3.93   Pi-Pi T-shaped
C:DG12 - D: Complex 2:C 2.47   Pi-Alkyl
C:DG12 - D: Complex 2:C 3.55 Hydrophobic Pi-Alkyl
C:DG12 - D: Complex 2:C 4.72   Pi-Alkyl
D:DC111 - D: Complex 2:C 5.07   Pi-Alkyl
D:DC112 - D: Complex 2:C 3.68   Pi-Alkyl
D:DA113 - D: Complex 2:C 4.22126   Pi-Alkyl