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. 2017 Mar 24;12(3):e0173750. doi: 10.1371/journal.pone.0173750

Fig 3. Phylogenetic reconstruction for the strain TS12.

Fig 3

ITS1/ITS2/D1-D2 concatenated sequence-based phylogeny was constructed using ML method with HKY85 as substitution model. aLTR values are indicated with corresponding nodes. Bar indicates the nucleotide substitution per site. Ustilago maydis was used as the outgroup. D1-D2, ITS1 and ITS2 sequences were deposited in the NCBI under accession numbers KR336671, KR336674 and KR336677 respectively. Accession numbers of the sequences used in this analysis are listed in S1 Table.