Table 2. Genetic composition of influenza virus A/tufted duck/SH-Germany/R8444/2016 isolated in Germany, 2016*†.
Genome segment, virus strain | Identity, % | Group |
---|---|---|
PB2 | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/duck/Mongolia/30/2015 (H3N8) | 97 | |
A/duck/Mongolia/118/2015 (H4N6) | 97 | |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) |
97 |
|
PB1 | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) | 99 | |
A/duck/Mongolia/179/2015 (H3N8) | 97 | |
A/duck/Mongolia/518/2015 (H10N3) |
97 |
|
PA | ||
A/wild duck/Poland/82A/2016 (H5N8) | 100 | Central Europe 2.3.4.4 2016 reassortant |
A/mallard/Republic of Georgia/13/2011 (H6N2) | 97 | |
A/duck/Mongolia/179/2015 (H3N8) | 97 | |
A/duck/Hokkaido/W9/2015 (H1N1) | 97 | |
A/greylag goose/Iceland/0921/2011 (H6N8) |
97 |
|
HA | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/tufted duck/Denmark/17740–1/2016 (H5N8) | 99 | |
A/mute swan/Croatia/70/2016 (H5N8) | 99 | |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) | 99 | |
A/duck/Eastern China/S1109/2014 (H5N8) |
98 |
|
NP | ||
A/wild duck/Poland/82A/2016 | 99 | Central Europe 2.3.4.4 2016 reassortant |
A/mallard/Republic of Georgia/13/2011 (H6N2) | 98 | |
A/chicken/Netherlands/16007311–037041/2016 (H7N9) | 97 | |
A/chicken/France/150169a/2015 (H5N1) | 97 | |
A/greylag goose/Iceland/0921/2011 (H6N8) |
97 |
|
NA | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) | 99 | |
A/mute swan/Croatia/70/2016 (H5N8) | 99 | |
A/duck/Eastern China/S1109/2014 (H5N8) |
98 |
|
MP | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) | 99 | |
A/mute swan/Croatia/70/2016 (H5N8) | 99 | |
A/duck/Mongolia/179/2015 (H3N8) |
98 |
|
NS | ||
A/wild duck/Poland/82A/2016 (H5N8) | 99 | Russia–Mongolia 2.3.4.4 2016 reassortant |
A/great crested grebe/Uvs-Nuur Lake/341/2016 (H5N8) | 99 | |
A/mute swan/Croatia/70/2016 (H5N8) | 99 | |
A/duck/Eastern China/S1109/2014 (H5N8) | 99 |
* Sequences were compared with entries in the GISAID (http://platform.gisaid.org) database. Details and acknowledgments in online Technical Appendix (https://wwwnc.cdc.gov/EID/article/23/4/16-1949-Techapp1.pdf). HA, hemagglutinin; MP, matrix protein; NA, neuraminidase; NS, nonstructural protein; NP, nucleoprotein; PA, polymerase acidic protein; PB, polymerase basic protein.