Table 1.
The 80-probe signature related to survival (Continuation)
| Gs | Gene | Probe ID | B | ND |
|---|---|---|---|---|
| IL2RA | ILMN_1683774 | 0 | 1 | |
| MARCH1 | ILMN_2094942 | 0.05 | 3 | |
| LAP3 | ILMN_1683792 | 0 | 1 | |
| GPR65 | ILMN_2232121 | 0.03 | 2 | |
| GPR65 | ILMN_1734740 | 0.05 | 2 | |
| FAM26F | ILMN_2066849 | 0 | 1 | |
| CXCL11 | ILMN_2067890 | 0 | 1 | |
| NFS1 | ILMN_1761314 | 0.05 | 2 | |
| CXCR6 | ILMN_1674640 | 0.68 | 10 | |
| RASSF5 | ILMN_2362902 | 0.07 | 2 | |
| NAPSB | ILMN_1723043 | 0.05 | 3 | |
| IKZF1 | ILMN_1676575 | 0 | 1 | |
| PTPN22 | ILMN_1715885 | 0 | 1 | |
| PTPRC | ILMN_1653652 | 0.07 | 3 | |
| PTPN22 | ILMN_2246328 | 0 | 1 | |
| G3 | RPL36AL | ILMN_2189936 | 0 | 1 |
| GARNL3 | ILMN_1779347 | 0 | 1 | |
| PNPLA4 | ILMN_1664348 | 0 | 1 | |
| SH3BGRL | ILMN_1702835 | 0.03 | 2 | |
| HS.576380 | ILMN_1848030 | 0 | 1 | |
| FMO1 | ILMN_1684401 | 0 | 1 | |
| CTSK | ILMN_1758895 | 0.1 | 4 | |
| EGR2 | ILMN_1743199 | 0 | 1 | |
| CLEC1A | ILMN_1691339 | 0 | 1 | |
| HSD11B1 | ILMN_2389501 | 0.03 | 2 | |
| CEBPA | ILMN_1715715 | 0 | 1 | |
| TIMP3 | ILMN_1701461 | 0.03 | 2 | |
| FBXL5 | ILMN_1673370 | 0 | 1 | |
| SCARNA9 | ILMN_1805064 | 0 | 1 | |
| PPM1M | ILMN_1657810 | 0.05 | 3 | |
| DOCK6 | ILMN_1801226 | 0 | 1 |
The 80 annotated Illumina probes distinguishing between basal-like subgroups are listed in this table. The official gene symbol (Gene), from UCSC Genome Browser, and Illumina probe IDs (Probe ID) are provided for each probe group (Gs), in the same order as shown in Fig. 1. This table also contains the betweenness centrality (B) and node degree (ND) values calculated for each probe in the basal-like training set