# filename of rdc table |
fn_rdc = riboA_rdcs.tbl |
# num_nt:71 |
start_resid= 13 |
end_resid= 83 |
# Sequence |
GGGAACAUAUAAUCCUAAUGAUAUGGUUUGGGAGUUUCUA |
CCAAGAGCCUUAAACUCUUGAUUAUGUUCCC |
# num of helices: 3 |
# helix: 1 |
13 GC 83 |
14 GC 82 |
15 GC 81 |
16 AU 80 |
17 AU 79 |
18 CG 78 |
19 AU 77 |
20 UA 76 |
21 AU 75 |
# helix: 2 |
25 UA 45 |
26 CG 44 |
27 CG 43 |
28 UG 42 |
29 AU 41 |
30 AU 40 |
31 UU 39 |
# helix: 3 |
54 CG 72 |
55 AU 71 |
56 AU 70 |
57 GC 69 |
58 AU 68 |
59 GC 67 |
# Angles between duplexes |
1–2 0+-30 or 180+-30 |
1–3 0+-30 or 180+-30 |
2–3 0+-30 or 180+-30 |