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. 2017 Mar 29;15:71. doi: 10.1186/s12916-017-0834-4

Fig. 3.

Fig. 3

Identification of mixed infection. a Counts of genome sites which were called as a reference base but showed a significant proportion of sequence reads also supporting a variant base call (035-1); b the equivalent plot for an isolate with no mixed infection (035-2). The presence of a second peak in a is suggestive of a mixture with a minority genotype