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. 2017 Mar 29;12(3):e0174642. doi: 10.1371/journal.pone.0174642

Table 3. Ten replicated SNPs associated with PTB in the KARE and HEXA Studies.

Gene Chr. SNP Function Modela N/Rb KARE HEXA Joint Analysis
OR (95% CI)c P OR (95% CI)c P OR (95% CI)c P
CDCA7 2q31.1 rs7594926 intergenic D G/A 1.59 (1.22–2.08) 7.6×10−4 1.64 (1.05–2.56) 0.030 1.54 (1.23–1.89) 1.4×10−4
GBE1 3p12.2 rs2307058 intron R C/T 1.75 (1.31–2.33) 1.4×10−4 1.60 (1.02–2.50) 0.040 1.63 (1.29–2.05) 3.4×10−5
GADL1 3p23 rs9682385 intergenic A G/A 1.34 (1.14–1.58) 5.4×10−4 1.45 (1.11–1.91) 0.007 1.31 (1.15–1.50) 7.9×10−5
SPATA16 3q26.31 rs9840514 intergenic R T/C 1.79 (1.27–2.50) 9.5×10−4 1.96 (1.16–3.23) 0.011 1.96 (1.16–3.23) 5.4×10−5
C6orf118 6q27 rs9365798 intergenic D T/C 1.61 (1.27–2.04) 7.1×10−5 1.49 (1.02–2.17) 0.038 1.59 (1.32–1.92) 2.1×10−6
KIAA1432 9p24.1 rs4348560 intron R G/A 1.79 (1.28–2.50) 6.3×10−4 1.75 (1.04–2.94) 0.034 1.69 (1.30–2.22) 1.3×10−4
DMRT2 9p24.3 rs10738171 intergenic A C/T 1.33 (1.12–1.57) 8.9×10−4 1.34 (1.03–1.75) 0.029 1.30 (1.14–1.49) 1.3×10−4
CTR9 11p15.3 rs9787961 Near 5’-UTR R C/G 1.67 (1.26–2.21) 3.9×10−4 1.83 (1.17–2.85) 0.008 1.64 (1.30–2.06) 2.3×10−5
CCDC67 11q21 rs3019221 intron A G/C 1.61 (1.25–2.07) 2.3×10−4 1.50 (1.00–2.23) 0.048 1.56 (1.27–1.91) 2.1×10−5
CDH13 16q23.3 rs12716963 intron D C/T 1.54 (1.19–1.96) 7.7×10−4 1.72 (1.12–2.83) 0.012 1.56 (1.27–1.92) 2.6×10−5

Abbreviations: Chr., chromosome; CI, confidence interval; HEXA, Health Examinees Study; KARE, Korea Association Resource Study; OR, odds ratio.

a The genetic models that showed the most significant evidence for association with PTB: A, additive; D, dominant; R, recessive.

b N/R, non-risk/risk allele

c ORs and P values were estimated from the multiple logistic regression model adjusted for age, sex, and BMI.