Table 3. Ten replicated SNPs associated with PTB in the KARE and HEXA Studies.
Gene | Chr. | SNP | Function | Modela | N/Rb | KARE | HEXA | Joint Analysis | |||
---|---|---|---|---|---|---|---|---|---|---|---|
OR (95% CI)c | P | OR (95% CI)c | P | OR (95% CI)c | P | ||||||
CDCA7 | 2q31.1 | rs7594926 | intergenic | D | G/A | 1.59 (1.22–2.08) | 7.6×10−4 | 1.64 (1.05–2.56) | 0.030 | 1.54 (1.23–1.89) | 1.4×10−4 |
GBE1 | 3p12.2 | rs2307058 | intron | R | C/T | 1.75 (1.31–2.33) | 1.4×10−4 | 1.60 (1.02–2.50) | 0.040 | 1.63 (1.29–2.05) | 3.4×10−5 |
GADL1 | 3p23 | rs9682385 | intergenic | A | G/A | 1.34 (1.14–1.58) | 5.4×10−4 | 1.45 (1.11–1.91) | 0.007 | 1.31 (1.15–1.50) | 7.9×10−5 |
SPATA16 | 3q26.31 | rs9840514 | intergenic | R | T/C | 1.79 (1.27–2.50) | 9.5×10−4 | 1.96 (1.16–3.23) | 0.011 | 1.96 (1.16–3.23) | 5.4×10−5 |
C6orf118 | 6q27 | rs9365798 | intergenic | D | T/C | 1.61 (1.27–2.04) | 7.1×10−5 | 1.49 (1.02–2.17) | 0.038 | 1.59 (1.32–1.92) | 2.1×10−6 |
KIAA1432 | 9p24.1 | rs4348560 | intron | R | G/A | 1.79 (1.28–2.50) | 6.3×10−4 | 1.75 (1.04–2.94) | 0.034 | 1.69 (1.30–2.22) | 1.3×10−4 |
DMRT2 | 9p24.3 | rs10738171 | intergenic | A | C/T | 1.33 (1.12–1.57) | 8.9×10−4 | 1.34 (1.03–1.75) | 0.029 | 1.30 (1.14–1.49) | 1.3×10−4 |
CTR9 | 11p15.3 | rs9787961 | Near 5’-UTR | R | C/G | 1.67 (1.26–2.21) | 3.9×10−4 | 1.83 (1.17–2.85) | 0.008 | 1.64 (1.30–2.06) | 2.3×10−5 |
CCDC67 | 11q21 | rs3019221 | intron | A | G/C | 1.61 (1.25–2.07) | 2.3×10−4 | 1.50 (1.00–2.23) | 0.048 | 1.56 (1.27–1.91) | 2.1×10−5 |
CDH13 | 16q23.3 | rs12716963 | intron | D | C/T | 1.54 (1.19–1.96) | 7.7×10−4 | 1.72 (1.12–2.83) | 0.012 | 1.56 (1.27–1.92) | 2.6×10−5 |
Abbreviations: Chr., chromosome; CI, confidence interval; HEXA, Health Examinees Study; KARE, Korea Association Resource Study; OR, odds ratio.
a The genetic models that showed the most significant evidence for association with PTB: A, additive; D, dominant; R, recessive.
b N/R, non-risk/risk allele
c ORs and P values were estimated from the multiple logistic regression model adjusted for age, sex, and BMI.