Table 2.
Identification target of novel miRNA by the degradome sequencing.
| miRNA | Target ID | Target function | Homologous At. gene | Abbreviation |
|---|---|---|---|---|
| novel_mir_100 | MDP0000360515 | ATP synthase alpha/beta family protein | AT5G08680 | |
| novel_mir_123 | MDP0000253809 | Annexin 2 | AT5G65020 | ANNAT2 |
| novel_mir_124 | MDP0000187925 | UDP-glucose pyrophosphorylase 2 | AT5G17310 | ATUGP2, UGP2 |
| novel_mir_144 | MDP0000136541 | MYB domain protein 105 | AT1G69560 | LOF2, MYB105 |
| novel_mir_144 | MDP0000146675 | MYB domain protein 105 | AT1G69560 | LOF2, MYB105 |
| novel_mir_144 | MDP0000330904 | |||
| novel_mir_176 | MDP0000368249 | |||
| mdm-novel_miR166a | MDP0000005879 | Homeobox gene 8 | AT4G32880 | ATHB8 |
| mdm-novel_miR166a | MDP0000050082 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT2G34710 | ATHB14, PHB |
| mdm-novel_miR166a | MDP0000126553 | Homeobox gene 8 | AT4G32880 | ATHB8 |
| mdm-novel_miR166a | MDP0000236500 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT5G60690 | IFL, REV |
| mdm-novel_miR166a | MDP0000242861 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT5G60690 | IFL, REV |
| mdm-novel_miR166a | MDP0000251484 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT1G52150 | ATHB15, ICU4 |
| mdm-novel_miR166a | MDP0000313059 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT1G52150 | ATHB15, ICU4 |
| mdm-novel_miR166a | MDP0000426630 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT5G60690 | IFL, REV |
| mdm-novel_miR166a | MDP0000943529 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | AT2G34710 | ATHB14, PHB |
| novel_mir_203 | MDP0000161842 | Ribosomal protein L4/L1 family | AT3G09630 | |
| novel_mir_203 | MDP0000680417 | Ribosomal protein L4/L1 family | AT3G09630 | |
| novel_mir_218 | MDP0000665406 | HAESA-like 1 | AT1G28440 | HSL1 |
| mdm-novel_miR169a | MDP0000146933 | Nuclear factor Y, subunit A9 | AT3G20910 | NF-YA9 |
| mdm-novel_miR169a | MDP0000164531 | Nuclear factor Y, subunit A7 | AT1G30500 | NF-YA7 |
| mdm-novel_miR169a | MDP0000183865 | Nuclear factor Y, subunit A7 | AT1G30500 | NF-YA7 |
| mdm-novel_miR169a | MDP0000250518 | Voltage dependent anion channel 1 | AT3G01280 | VDAC1 |
| mdm-novel_miR169a | MDP0000279028 | Nuclear factor Y, subunit A7 | AT1G30500 | NF-YA7 |
| mdm-novel_miR169a | MDP0000296077 | Nuclear factor Y, subunit A1 | AT5G12840 | NF-YA1 |
| novel_mir_237 | MDP0000095336 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_237 | MDP0000149531 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_237 | MDP0000210355 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_237 | MDP0000645731 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_237 | MDP0000751972 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_249 | MDP0000385086 | Protein of unknown function (DUF1685) | AT4G33985 | |
| novel_mir_249 | MDP0000434028 | Protein phosphatase 2A subunit A2 | AT3G25800 | PP2AA2 |
| novel_mir_249 | MDP0000509949 | Peroxidase superfamily protein | AT1G05260 | RCI3 |
| novel_mir_249 | MDP0000511597 | |||
| novel_mir_249 | MDP0000540293 | Protein phosphatase 2A subunit A2 | AT3G25800 | PP2AA2 |
| novel_mir_249 | MDP0000541775 | Uncharacterised protein family (UPF0497) | AT3G23200 | |
| novel_mir_249 | MDP0000651056 | AT5G05800 | ||
| novel_mir_249 | MDP0000674456 | |||
| novel_mir_249 | MDP0000690147 | ARM repeat superfamily protein | AT4G16490 | |
| novel_mir_249 | MDP0000701629 | |||
| novel_mir_263 | MDP0000165935 | Nucleotide/sugar transporter family protein | AT5G17630 | |
| novel_mir_266 | MDP0000368249 | |||
| novel_mir_292 | MDP0000530198 | EXORDIUM like 3 | AT5G51550 | EXL3 |
| novel_mir_292 | MDP0000778016 | EXORDIUM like 3 | AT5G51550 | EXL3 |
| mdm-novel_miR159a | MDP0000147309 | MYB domain protein 65 | AT3G11440 | MYB65 |
| novel_mir_348 | MDP0000297664 | Mitochondrial substrate carrier family protein | AT5G19760 | |
| novel_mir_384 | MDP0000125404 | Protein of unknown function, DUF538 | AT1G02816 | |
| novel_mir_384 | MDP0000160246 | Protein of unknown function, DUF538 | AT1G02816 | |
| novel_mir_384 | MDP0000757026 | Protein of unknown function, DUF538 | AT1G02816 | |
| novel_mir_388 | MDP0000751972 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_421 | MDP0000751972 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_447 | MDP0000095336 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_447 | MDP0000149531 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_447 | MDP0000210355 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_447 | MDP0000645731 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_447 | MDP0000751972 | Serine protease inhibitor (SERPIN) family protein | AT1G47710 | |
| novel_mir_454 | MDP0000265913 | Farnesyl diphosphate synthase 1 | AT5G47770 | FPS1 |
| novel_mir_454 | MDP0000299402 | Farnesyl diphosphate synthase 1 | AT5G47770 | FPS1 |
| novel_mir_493 | MDP0000126528 | F-box family protein | AT4G24210 | SLY1 |
| novel_mir_497 | MDP0000204850 | Pentatricopeptide repeat (PPR) superfamily protein | AT3G53700 | MEE40 |
| novel_mir_58 | MDP0000240422 | Ribosomal protein L10 family protein | AT2G40010 | |
| novel_mir_58 | MDP0000398869 | Ribosomal protein L10 family protein | AT2G40010 | |
| novel_mir_58 | MDP0000749281 | Ribosomal protein L10 family protein | AT2G40010 | |
| novel_mir_79 | MDP0000243304 | NB-ARC domain-containing disease resistance protein | AT3G14470 | |
| novel_mir_80 | MDP0000589558 | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | AT1G69170 | |
| novel_mir_86 | MDP0000320808 | ENTH/VHS/GAT family protein | AT1G06210 | |
| novel_mir_93 | MDP0000231391 | Leucine-rich repeat protein kinase family protein | AT2G01820 | |
| novel_mir_93 | MDP0000268423 | Leucine-rich repeat protein kinase family protein | AT2G01820 |