Table 3.

Summary of the detected QTLs for RSA-related traits from RIL population grown in the paper roll test (P), hydroponics (H) and vermiculite (V) culture systems.

Trait	Chromosome	Bina	Position	Interval	Flanking marker		R2,b	Additivec	LOD
									P	H	V
RDW	3	3.04	117	115–119	umc1504	umc1773	5.9	3	0.5	0.5	2.6d
	3	3.04	73	70–78	umc1012	phi029	17.3	3.8	0.3	4.9	0.1
	5	5.04–5.05	136	125–154	umc1221	umc2164	20.28	−4.10	0.6	2.8	0.5
	7	7.03	108	103–114	mmc0411	umc1888	9.76	3.22	2.9	0	1.9
PRL	2	2.02–2.03	34	25–42	umc1542	bnlg2248	8.9	−1.0	0.3	3.7	0.1
	3	3.04	120	117–125	umc1223	phi035	9.6	1.2	2.8	0.3	1
	4	4.05	84	76–89	umc1662	umc1953	12.3	−1.2	0.1	4.3	0.4
	5	5.03	34	22–40	bnlg1879	umc1447	9.8	−1.0	0.8	3.2	1.3
	5	5.07	225	216–228	phi048	umc1072	9.7	1.2	2.8	0.1	1
SRL	2	2.05	84	78−89	umc1635	umc1003	15.5	−6.2	3.2	0.4	0.6
	3	3.04	69,74	69−79	umc1012	phi029	12.7,11.8	10.1,9.7	2.2	4.6	4.2
	8	8.07–8.08	135	126−147	umc1268	umc1933	12.5	8.2	1.0	2.8	0.3
	9	9.01	6	0−16	umc1867	bnlg1583	9.5	7.3	0.2	2.8	0.3
SRN	2	2.01–2.02	10	4−19	phi96100	umc1518	7.1	0.3	0.6	0.4	3.2
	2	2.06–2.07	107	106−111	nc003	umc1637	14.5	0.4	0	3.6	0.6
	2	2.07	122	118−131	umc1637	bnlg2077	9.8	0.3	0	3.2	0.3
	5	5.07–5.09	239	233−241	umc1072	bnlg386	17.8	−0.3	2.9	0.1	0
	6	6.05	92	86−95	umc1020	bnlg1732	19.3	0.4	3.3	0	0.1
	6	6.05–6.07	114	113−123	bnlg1732	umc2165	19.3	−0.4	4.6	0.1	0.4
CRL	1	1.02–1.03	73	66−75	umc1568	umc1403	19.5	−7.0	0.5	3.7	0.4
	1	1.06–1.07	160, 169	151−174	umc1754	bnlg1556	12.5,31.9	−4.9, −8.4	0.1	2.7	4.1
	3	3.01	9	2−18	umc1793	umc1394	8.3	4.2	0	0.8	2.9
	4	4.05–4.06	124	113−142	umc1346	bnlg2291	20.9	−1.2	2.7	0.3	0.2
	5	5.04	59	52−68	phi113	umc1990	7.4	−4.0	0.6	0.1	2.8
	6	6.07	167	149−175	phi299852	bnlg1740	16.7	6.1	0.1	0.4	2.9
	8	8.06–8.07	107	98−113	umc1997	bnlg1823	16.2	−5.5	0.1	3.8	0
	8	8.09	195	190−201	phi015	bnlg1131	7.2	−3.9	0.4	0.1	3.1
CRN	1	1.04–1.05	128	122−131	umc2112	bnlg1884	15.0	0.5	0.8	4.4	0.1
	1	1.06	152	149−160	umc1754	umc1335	21.3	−0.5	1.3	4.7	2.1
	4	4.04–4.05	74	71−79	umc1963	phi079	14.5	0.4	2.8	0	0.1
	6	6.04–6.05	61	50−66	umc1857	bnlg1174	7.4	0.3	0.9	2.5	0
	7	7.03–7.04	140	137−152	umc1301	umc1710	19.4	−0.4	3.2	0.2	0
LRL	4	4.05	78	68−87	umc1662	phi079	10.2	−53.0	1.2	3	0.8
	5	5.01–5.03	32	18−36	bnlg1879	umc1447	10.4	−7.5	3.3	0.3	0.9
	5	5.05	152	133−159	umc2164	bnlg278	29.8	−137.9	0.2	2.4	3.4
	3	3.08	211	205−217	phi046	umc1320	43.8	166.6	1.1	0.1	3.5
	3	3.08–3.09	234	228−241	umc1320	phi047	45.0	169.5	0.6	2	3.5
	10	10.03	58	53−66	umc1345	umc1336	49.9	183.0	0.4	0.7	4.1
LRDPR	1	1.05–1.06	140	128−161	bnlg1884	umc1754	15.6	0.7	3	2.7	2.3
	1	1.06	155	149−173	umc1754	umc1335	15.1	0.5	3	2.5	0.3
	2	2.04–2.05	74	67−78	umc2248	umc1003	7.2	0.4	0.3	0.1	3.4
	4	4.07	149	146−154	umc1620	umc1194	25.8	−0.7	5.6	1.2	0.5
	5	5.04–5.05	144, 150	133−161	umc1221	bnlg278	10.3,19.8	−0.5, −0.6	6	2.3	2.7

^aChromosome bins of the marker and position taken from IBM 2008;

^bR², the percentage of the phenotypic variance explained by a putative QTL;

^cAdd, additive effects; Positive and negative values represented Ye478 and Wu312, respectively, that carried the allele for an increase of trait value;

^dBold number represented the LOD value for a detected QTL in the corresponding culture system.