Table 4.
Description and expression of up-regulated genes encoding transporters
| Gene ID | Descriptiona | Expression level (hpi)b | |||||
|---|---|---|---|---|---|---|---|
| 1 | 3 | 6 | 12 | 24 | 48 | ||
|
1. ABC transporter superfamily
1.1 Pleiotropic Drug Resistance | |||||||
| SS1G_06715 | Pleiotropic Drug Resistance (PDR) | 2.0 | - | - | - | - | - |
| SS1G_13659 | pleiotropic drug resistance-like (PDR) | - | - | - | - | 3.1 | 13.5 |
| SS1G_04483 | pleiotropic drug resistance-like (PDR) | - | - | - | - | - | 4.6 |
| 1.2 Multi Drug Resistance | |||||||
| SS1G_04756 | ABC multidrug transporter | 3.4 | 7.9 | 6.5 | 3.7 | 2.4 | - |
| SS1G_07287 | ABC multidrug transporter | 3.5 | 3.2 | 2.6 | - | - | 2.2 |
| SS1G_03324 | ABC multidrug transporter | 3.5 | 4.8 | 4.4 | - | - | - |
| SS1G_13112 | ABC multidrug transporter | - | 4.1 | 6.2 | 3.9 | - | - |
| SS1G_02000 | ABC multidrug transporter | - | - | 3.9 | 3.2 | - | - |
| SS1G_06062 | ABC multidrug transporter | - | - | - | - | 2.4 | 2.8 |
| 1.3 Other families | |||||||
| SS1G_04757 | mitochondrial ATP-binding cassette protein involved in iron homeostasis | - | 6.5 | 5.1 | 3.4 | - | - |
| SS1G_07963 | ABC transporter with iron-containing redox enzyme with death domains | - | - | - | - | 4.0 | 8.5 |
| SS1G_12070 | ABC lipid transporter | - | - | - | - | - | 2.6 |
| SS1G_10747 | ABC peroxysomal fatty Acyl CoA transporter | - | - | - | - | - | 3.2 |
| SS1G_05904 | ABC peroxysomal fatty Acyl CoA transporter | - | - | - | - | - | 2.0 |
| 2. MFS transporter superfamily | |||||||
| 2.1 Efflux pumps and drug resistance | |||||||
| SS1G_10155 | MFS drug efflux and drug resistance | 10.1 | 5.5 | 3.7 | - | - | - |
| SS1G_11948 | MFS drug efflux and drug resistance | 2.8 | 6.7 | 5.5 | - | - | - |
| SS1G_00919 | MFS gliotoxin efflux transporter | - | 2.7 | 3.0 | - | - | - |
| SS1G_09759 | MFS aflatoxin efflux transporter | - | 8.0 | - | - | - | - |
| SS1G_05556 | MFS drug efflux and drug resistance | - | - | 2.4 | - | - | - |
| SS1G_06662 | MFS toxin efflux pump | - | - | 3.0 | - | - | - |
| SS1G_05572 | MFS drug resistance transporter | 11.4 | 2.9 | - | - | - | - |
| SS1G_02358 | MFS drug resistance transporter | - | - | - | 4.1 | 3.7 | 4.3 |
| SS1G_12101 | MFS drug resistance transporter | - | - | - | - | 2.4 | - |
| SS1G_02394 | MFS drug resistance transporter | - | - | - | - | - | 4.6 |
| SS1G_05756 | MFS drug resistance transporter | - | - | - | - | - | 15.2 |
| SS1G_10566 | MFS drug resistance transporter | - | - | - | - | - | 5.5 |
| SS1G_05556 | MFS drug resistance transporter | - | - | - | - | - | 2.0 |
| SS1G_05095 | MFS fungal trichothecene efflux pump (TRI12) | - | - | - | - | - | 7.1 |
| SS1G_05145 | MFS fungal trichothecene efflux pump (TRI12) | - | - | - | - | 5.0 | - |
| SS1G_13024 | MFS drug resistance transporter | - | - | - | - | - | 3.6 |
| SS1G_11919 | MFS multidrug transporter | - | 2.7 | 2.3 | - | - | - |
| SS1G_02623 | MFS multidrug transporter | - | - | - | - | - | 4.7 |
| SS1G_08554 | MFS multidrug transporter | - | - | - | - | - | 2.9 |
| SS1G_10279 | MFS multidrug transporter | - | - | - | - | - | 2.1 |
| SS1G_09892 | MFS multidrug transporter | - | - | - | - | - | 10.2 |
| SS1G_02931 | MFS multidrug transporter | - | - | - | - | - | 2.8 |
| SS1G_02048 | spermidine drug resistance transporter | 2.1 | - | - | - | - | 3.2 |
| 2.2 Sugar transporters | |||||||
| SS1G_04841 | hexose transporter | 4.1 | 2.9 | - | - | - | - |
| SS1G_13734 | hexose transporter HXT13 | - | 2.1 | - | - | - | - |
| SS1G_04273 | hexose transporter | - | - | - | - | 6.1 | 15.8 |
| SS1G_12412 | hexose transporter | - | - | 2.1 | - | 2.5 | 2.4 |
| SS1G_09710 | MFS sugar transporter | - | - | 2.7 | 2.6 | 4.8 | 6.5 |
| SS1G_06023 | MFS monosaccharide transporter | 6.9 | 6.7 | 7.0 | 4.9 | - | - |
| SS1G_10125 | MFS monosaccharide transporter | 2.1 | 2.4 | - | - | - | - |
| SS1G_06620 | MFS monosaccharide transporter | - | - | - | - | 2.4 | - |
| SS1G_07618 | MFS monosaccharide transporter | - | - | - | - | - | 2.1 |
| SS1G_08794 | MFS sucrose transporter | - | - | 2.6 | - | - | - |
| SS1G_04208 | MFS sugar transporter | - | - | - | 4.0 | 36.7 | 49.2 |
| SS1G_10413 | MFS sugar transporter | - | - | - | 2.3 | 4.6 | 4.8 |
| SS1G_06751 | MFS sugar transporter | - | - | - | - | 2.0 | - |
| SS1G_08117 | MFS sugar transporter | - | - | - | - | 2.8 | - |
| SS1G_11591 | MFS sugar transporter | - | - | - | - | 10.7 | 9.4 |
| SS1G_01523 | MFS sugar transporter | - | - | - | - | 13.1 | 12.5 |
| SS1G_00928 | MFS sugar transporter | - | - | - | - | 7.2 | 10.6 |
| SS1G_08467 | MFS sugar transporter | - | - | - | - | 2.9 | 2.5 |
| SS1G_07132 | MFS sugar transporter | - | - | - | - | 8.3 | 6.3 |
| SS1G_01759 | MFS sugar transporter | - | - | - | - | - | 2.8 |
| SS1G_14316 | MFS sugar transporter | - | - | - | - | - | 6.1 |
| SS1G_06402 | MFS sugar transporter | - | - | - | - | - | 16.2 |
| SS1G_01302 | MFS sugar transporter | - | - | - | - | - | 47.6 |
| SS1G_03579 | MFS sugar transporter | - | - | - | - | - | 4.1 |
| SS1G_05006 | MFS sugar transporter | - | - | - | - | - | 11.8 |
| SS1G_08982 | MFS quinate transporter | - | - | - | - | 18.9 | 26.1 |
| SS1G_09293 | MFS quinate transporter | - | - | - | - | 3.5 | 2.9 |
| SS1G_08981 | MFS quinate transporter | - | - | - | - | 49.3 | 38.4 |
| SS1G_00139 | MFS carbohydrate transporter | - | 3.1 | 2.2 | 2.0 | - | - |
| SS1G_04149 | MFS carbohydrate transporter | - | 3.2 | 2.5 | - | - | 8.2 |
| SS1G_07210 | MFS carbohydrate transporter | - | - | - | - | 2.5 | 2.3 |
| SS1G_08328 | MFS carbohydrate transporter | - | - | - | - | 5.8 | 4.1 |
| SS1G_13671 | MFS carbohydrate transporter | - | - | - | - | 2.4 | - |
| SS1G_14028 | MFS carbohydrate transporter | - | - | - | - | 2.1 | 2.0 |
| SS1G_13819 | MFS carbohydrate transporter | - | - | - | - | - | 8.1 |
| SS1G_11142 | MFS monocarboxylate transporter | - | - | - | - | 3.6 | - |
| SS1G_01656 | MFS monocarboxylate transporter | - | - | - | - | - | 2.2 |
| SS1G_07861 | MFS galactonate transporter | 2.8 | - | - | - | - | - |
| SS1G_09368 | MFS galactonate transporter | - | - | 3.6 | 5.8 | 8.3 | 9.0 |
| SS1G_09803 | MFS galactonate transporter | - | - | - | 4.2 | 14.9 | 13.1 |
| SS1G_01055 | MFS galactonate transporter | - | - | - | - | 3.8 | - |
| SS1G_10065 | MFS galactonate transporter | - | - | - | - | 73.2 | 487.6 |
| SS1G_11224 | MFS galactonate transporter | - | - | - | - | 3.3 | 2.2 |
| SS1G_11609 | MFS galactonate transporter | - | - | - | - | 3.0 | 13.0 |
| SS1G_12649 | MFS galactonate transporter | - | - | - | - | 6.9 | 2.9 |
| SS1G_12698 | MFS galactonate transporter | - | - | - | - | 4.0 | 5.7 |
| SS1G_05090 | MFS galactonate transporter | - | - | - | - | 7.2 | 5.7 |
| SS1G_10896 | MFS alpha glucoside:h + symporter | - | - | - | - | 4.4 | 2.3 |
| SS1G_13094 | MFS alpha glucoside:h + symporter | - | - | - | - | 5.0 | 18.6 |
| SS1G_03673 | 4-hydroxyphenylacetate permease and sugar transporter | - | - | - | - | - | 5.3 |
| SS1G_04849 | MFS-fucose permease | - | - | - | - | - | 3.1 |
| SS1G_02117 | lactose permease | - | - | - | 2.8 | 23 | 31.3 |
| SS1G_08398 | maltose permease | - | 4.2 | - | - | - | 3.8 |
| SS1G_07922 | maltose permease | - | - | - | - | 2.2 | - |
| SS1G_12954 | maltose permease | - | - | - | - | - | 8.2 |
| 2.3 Oligopeptides | |||||||
| SS1G_02676 | oligopeptide transporter | 2.0 | - | - | - | 4.0 | 5.2 |
| SS1G_09296 | oligopeptide transporter | - | - | - | - | 3.3 | 3.1 |
| SS1G_09297 | oligopeptide transporter | - | - | - | - | - | 2.8 |
| SS1G_10121 | MFS peptide transporter | 5.9 | 7.4 | 5.7 | 3.0 | - | - |
| SS1G_07522 | MFS peptide transporter | - | - | 2.1 | - | - | 4.1 |
| 2.4 others | |||||||
| SS1G_08628 | MFS transporter | 5.9 | 6.6 | 5.6 | 3.0 | 2.4 | - |
| SS1G_04769 | MFS transporter | - | - | - | - | - | 7.3 |
| SS1G_13941 | MFS general substrate transporter | - | 3.0 | - | - | - | - |
| SS1G_13194 | MFS general substrate transporter | - | - | - | - | 2.2 | - |
| SS1G_07517 | MFS vacuole effluxer Atg22 transporter | - | 3.5 | 3.5 | - | 2.7 | 2.4 |
| SS1G_04978 | MFS sulfate transporter | - | - | - | - | 2.2 | - |
| SS1G_12690 | MFS nitrite transporter | - | 7.0 | 12.2 | 10.7 | - | - |
| SS1G_02906 | MFS nicotinic acid transporter | - | - | - | - | 3.8 | 2.1 |
| 3. Amino acid transporters | |||||||
| SS1G_08387 | amino acid transporter | - | - | - | 3.0 | 10.4 | 9.5 |
| SS1G_11233 | amino acid transporter | - | - | - | - | 2.7 | - |
| SS1G_01802 | amino acid transporter | - | - | - | - | - | 3.9 |
| SS1G_09839 | amino acid transporter | - | - | - | - | - | 13.3 |
| SS1G_14102 | choline, amino acid permease transport | - | - | - | 2.3 | - | - |
| SS1G_05293 | choline, amino acid permease transport | - | - | - | - | - | 5.0 |
| SS1G_06535 | choline, amino acid permease transport | - | - | - | - | - | 5.1 |
| SS1G_06536 | choline, amino acid permease transport | - | - | - | - | - | 3.1 |
| SS1G_04884 | ammonium transporter | - | - | - | - | 6.8 | - |
| SS1G_11781 | arginine permease | 2.2 | - | - | - | - | - |
| SS1G_11563 | amino acid permease | 3.2 | 4.7 | 4.9 | 5.5 | - | - |
| SS1G_02549 | amino acid permease | 3.1 | 4.2 | 3.9 | 2.2 | - | - |
| SS1G_14381 | amino acid permease | 2.6 | 4.6 | 3.8 | 3.3 | - | - |
| SS1G_13916 | amino acid permease | 9.1 | 11.5 | 8.6 | 6.9 | 2.3 | - |
| SS1G_10633 | amino acid permease | - | 2.1 | 2.7 | 2.1 | 2.4 | 4.9 |
| SS1G_03403 | amino acid permease | - | - | - | - | 3 | - |
| SS1G_11780 | amino acid permease | - | - | - | - | - | 2.9 |
| SS1G_06841 | amino acid permease | - | - | - | - | - | 2.7 |
| Others | |||||||
| SS1G_03654 | formate nitrate transporter | 3.0 | 3.2 | 3.1 | 3.4 | 4.0 | 3.9 |
| SS1G_09621 | mitochondrial phosphate carrier protein | 3.8 | 5.0 | 4.4 | 3.3 | - | 3.0 |
| SS1G_01720 | C4-dicarboxylate transporter | 20.2 | 19.0 | 18.8 | 8.5 | - | - |
| SS1G_02619 | C4-dicarboxylate transporter | 2.2 | 2.7 | 2.6 | - | - | - |
| SS1G_12337 | calcium proton exchanger | 2.5 | 3 | 2.2 | - | - | 2.6 |
| SS1G_02802 | putative Mg2+ transporter | 2.6 | 2.8 | 2.4 | - | - | 3.8 |
| SS1G_02548 | UDP-N-acetylglucosamine transporter | 2.4 | 2.8 | 2.8 | - | - | - |
| SS1G_11564 | lysosomal cystine transporter | 2.1 | 3.0 | 2.5 | - | - | - |
| SS1G_06298 | cation efflux family transporter | 3.1 | 4.0 | 3.5 | - | - | - |
| SS1G_09822 | monocarboxylate permease-like protein | 2.1 | 2.5 | - | - | - | 2.7 |
| SS1G_06910 | vacuolar iron transporter | 2.7 | - | 2.3 | - | 3.1 | 4.0 |
| SS1G_03019 | carnitine mitochondrial carrier protein | 2.4 | - | 2.6 | - | - | 3.4 |
| SS1G_08146 | AGZA family xanthine/uracil permease | 3 | - | - | - | - | - |
| SS1G_10280 | polyamine transport protein | - | 2.7 | 2.1 | - | - | - |
| SS1G_04686 | phosphate/sulfate permease | - | 4.2 | - | - | 3.3 | - |
| SS1G_12991 | cation, potassium transporter | - | - | 2.4 | - | - | - |
| SS1G_08795 | succinate fumarate, mitochondrial transporter | - | - | 5.4 | - | - | 8.0 |
| SS1G_06006 | purine-cytosine permease | - | - | - | 6.4 | 3.7 | - |
| SS1G_03305 | solute carrier protein | - | - | - | 3.0 | - | - |
| SS1G_11712 | cation, magnesium transporter | - | - | - | - | 2.4 | - |
| SS1G_07645 | cation, potassium transporter | - | - | - | - | 2.2 | 2.5 |
| SS1G_02434 | mitochondrial 2-oxoglutarate malate carrier protein | - | - | - | - | 45.3 | 44.7 |
| SS1G_06806 | 3-oxoacyl-[acyl-carrier protein] reductase | - | - | - | - | 3.7 | 5.3 |
| SS1G_10890 | acetyl-CoA acetyltransferases | - | - | - | - | 3.0 | 3.4 |
| SS1G_04606 | arsenite efflux transporter | - | - | - | - | - | 2.8 |
| SS1G_01231 | sulfate permease | - | - | - | - | - | 5.7 |
| SS1G_01111 | cytosine permease | - | - | - | - | - | 3.6 |
| SS1G_10204 | mitochondrial carrier protein | - | - | - | - | - | 2.2 |
| SS1G_06998 | peroxisomal, mitochondrial carrier protein | - | - | - | - | - | 2.0 |
| SS1G_04019 | mitochondrial carrier protein | - | - | - | - | - | 2.5 |
| SS1G_08663 | solute carrier protein | - | - | - | - | - | 2.5 |
| SS1G_05281 | fatty acid transporter involves in acyl-CoA synthetase) | - | - | - | - | - | 4.3 |
| SS1G_06664 | nucleoside transporter | 3.7 | 5.7 | 5.7 | 4.3 | 2.8 | - |
| SS1G_06212 | nucleoside transporter | 3.2 | - | - | - | - | - |
| SS1G_04537 | nucleoside transporter | - | - | - | - | 2.6 | - |
| SS1G_09667 | nucleoside transporter | - | - | - | - | - | 2.3 |
aAnnotation based on the presence of conserved PFAM domains and BLAST reports
bFold change relative to 0 h post inoculation (hpi). (-) No significant change in expression
More information about the genes can be found in Additional file 3: Table S3