Table 5.
Description and expression of up-regulated genes involved in detoxification
| Gene ID | Descriptiona | Expression level (hpi)b | |||||
|---|---|---|---|---|---|---|---|
| 1 | 3 | 6 | 12 | 24 | 48 | ||
| SS1G_01918 | glutathione S-transferase | 19.1 | 24.8 | 34.6 | 45.0 | 189.0 | 19.1 |
| SS1G_10108 | glutathione S-transferase | - | - | - | 3.5 | 4.1 | 2.3 |
| SS1G_08210 | glutathione S-transferase | - | - | - | - | 2.6 | - |
| SS1G_04914 | glutathione S-transferase | - | - | - | - | 2.1 | - |
| SS1G_07195 | glutathione S-transferase | - | - | - | - | 2.7 | 2.8 |
| SS1G_14440 | glutathione S-transferase | - | - | - | - | 4.5 | 3.7 |
| SS1G_09479 | glutathione S-transferase | - | - | - | - | - | 40.1 |
| SS1G_08258 | glutathione S-transferase with glutathionyl-hydroquinone reductase, ECM4 domain | - | - | - | - | 3.1 | 2.4 |
| SS1G_09997 | UDP-glucuronosyl and udp-glucosyltransferase (brassinin) | - | - | - | - | 28.0 | 223.2 |
| SS1G_03517 | UDP-glucoronosyl and udp-glucosyltransferase family protein | 4.5 | 3.7 | - | 5.0 | 8.2 | 10.8 |
| SS1G_13524 | glucosyltransferase family | 6.3 | 4.9 | 4.2 | 2.5 | - | 2.9 |
| SS1G_13754 | nitrilase-cyanide hydratase | 3.2 | 3.5 | 3.1 | 2.2 | 4.6 | 4.4 |
| SS1G_10174 | nitrilase-cyanide hydratase | - | 11.6 | 16.3 | 19.7 | 29.8 | 58.6 |
| SS1G_01652 | nitrilase-cyanide hydratase | - | - | - | - | 3.4 | 2.3 |
| SS1G_11485 | cyanate lyase, cyanase superfamily | - | - | - | - | 2.4 | - |
| SS1G_10881 | 2-nitropropane dioxygenase | 2.8 | - | - | - | - | - |
| SS1G_14466 | 2-nitropropane dioxygenase | 2.8 | 4.0 | 2.5 | - | - | 3.0 |
| SS1G_00355 | 2-nitropropane dioxygenase | - | - | - | - | 3.4 | 5.4 |
| SS1G_11235 | 2-nitropropane dioxygenase | - | - | - | - | 2.7 | 3.5 |
aAnnotation based on the presence of conserved PFAM domains and BLAST reports
bFold change relative to 0 h post inoculation (hpi). (-) No significant change in expression
More information about the genes can be found in Additional file 3: Table S3