Table 8.
Description and expression of up-regulated genes involved in fungal development
| Gene ID | Descriptiona | Expression level (hpi)b | |||||
|---|---|---|---|---|---|---|---|
| 1 | 3 | 6 | 12 | 24 | 48 | ||
| 1. Reserve Mobilization | |||||||
| SS1G_05192 | acid trehalase | - | - | - | - | 6.7 | 5.8 |
| SS1G_01494 | 1,3-alpha-glucanase/mutanase | - | - | - | - | - | 30.7 |
| SS1G_09861 | 1,3-alpha-glucanase/mutanase | - | - | - | - | - | 15 |
| 2. Cell Wall | |||||||
| 2.1 Turnover | |||||||
| SS1G_05454 | chitinase | - | - | 2.4 | - | 3.5 | 2.7 |
| SS1G_11700 | chitinase | - | - | - | - | 3.7 | 69.1 |
| SS1G_05897 | chitinase | - | - | - | - | 3 | 2.6 |
| SS1G_11304 | chitinase | - | - | - | - | - | 4.8 |
| SS1G_08695 | class III chitinase | - | - | - | 5.8 | 8.2 | 11.7 |
| SS1G_11212 | class III chitinase | - | - | - | - | - | 9.3 |
| SS1G_12510 | class V chitinase | - | - | - | - | 11.2 | 66.9 |
| SS1G_09403 | alpha-N-acetylglucosaminidase | - | - | - | - | 2.9 | - |
| SS1G_12837 | beta-N-acetylglucosaminidase | - | - | - | - | 2.3 | - |
| SS1G_10038 | beta-N-acetylglucosaminidase | - | - | - | - | - | 3 |
| SS1G_04898 | polysaccharide (chitin) deacetylase | - | - | 15.2 | - | - | 12.7 |
| SS1G_01131 | polysaccharide (chitin) deacetylase | - | - | - | - | 3 | 3.6 |
| SS1G_00642 | polysaccharide (chitin) deacetylase | - | - | - | - | - | 8.3 |
| SS1G_12836 | N-acetylglucosamine-6-phosphate deacetylase | - | - | - | - | - | 6.7 |
| SS1G_01229 | exo-beta 1,3 glucanase | - | - | - | - | 3.4 | 22.8 |
| SS1G_09858 | exo-beta 1,3 glucanase | - | - | - | - | - | 2.8 |
| SS1G_12930 | GPI-anchored cell wall beta-1,3-endoglucanase | 8.5 | 6.4 | 3.9 | - | - | 2.2 |
| SS1G_04852 | GPI-anchored cell wall beta-endoglucanase | 2.1 | - | - | - | - | - |
| 2.2 Biosynthesis | |||||||
| SS1G_04969 | glycosyl transferase (cell wall synthesis) | 2.2 | - | - | - | - | - |
| SS1G_04062 | glycosyl transferase (cell wall synthesis) | - | 3.6 | 3.8 | - | - | - |
| SS1G_07313 | lipopolysaccharide biosynthesis protein | - | - | - | - | - | 2.4 |
| 3. Other | |||||||
| SS1G_02742 | heterokaryon incompatibility protein | 3.8 | 3.6 | 3.1 | 2.8 | - | - |
| SS1G_02744 | heterokaryon incompatibility protein (SEC1) | 3.7 | 5.5 | - | 5 | 3 | 3 |
| SS1G_02602 | heterokaryon incompatibility protein | 2.3 | - | - | - | - | - |
| SS1G_03889 | heterokaryon incompatibility protein | - | 3.2 | - | - | - | - |
| SS1G_11165 | heterokaryon incompatibility protein | - | 3.3 | 2.2 | - | - | - |
| SS1G_06800 | heterokaryon incompatibility protein | - | 3.6 | - | - | - | - |
| SS1G_08974 | heterokaryon incompatibility protein (WD40 repeat) | - | - | - | - | 2.7 | - |
| SS1G_06855 | heterokaryon incompatibility protein | - | - | - | - | 5.2 | 2.4 |
| SS1G_12973 | heterokaryon incompatibility protein | - | - | - | - | - | 2 |
| SS1G_09167 | heterokaryon incompatibility protein | - | - | - | - | - | 2.5 |
| SS1G_11315 | heterokaryon incompatibility protein | - | - | - | - | - | 4 |
| SS1G_07526 | ferritin-like sexual development protein | 3 | 2.5 | 2.5 | - | - | 23.9 |
| SS1G_04316 | acyltransferase (hard surface induced) | 2.5 | - | - | - | - | - |
| SS1G_10311 | DUF cell surface protein (MAS2 orthologue) | - | 2.1 | - | 2.5 | - | - |
| SS1G_11468 | CAS1 appressorium specific protein (MAS3 orthologue) | - | - | 2.9 | 7.3 | 12.9 | 10.5 |
| SS1G_14127 | gamma-glutamyltranspeptidase (SsGGT1) | - | - | 3.4 | 6.5 | 4.8 | 2.7 |
| SS1G_05330 | gamma-glutamyltranspeptidase | - | - | - | - | 2.1 | - |
| SS1G_12877 | conidiation-specific expression protein | - | - | - | - | 2.3 | 2.3 |
| SS1G_12133 | predicted protein (SSP2) | - | - | - | - | 4.7 | 9.6 |
| SS1G_07404 | predicted protein (Ss-Rh1) | - | - | - | - | 4.9 | 3.8 |
| SS1G_01614 | G protein-coupled receptor (SOP1) | - | - | - | - | 17.7 | 17.1 |
| SS1G_07626 | Velvet family | - | - | - | - | - | 5.2 |
| SS1G_13339 | choline carnitine O-acyltransferase | - | - | - | - | - | 3.4 |
| SS1G_02422 | UDP-galactopyranose mutase (GLF) | - | - | - | - | - | 3.9 |
| SS1G_10940 | gamma-glutamyltranspeptidase | - | - | - | - | - | 4 |
| SS1G_14065 | predicted protein (SSP1) | - | - | - | - | - | 47 |
aAnnotation based on the presence of conserved PFAM domains and BLAST reports
bFold change relative to 0 h post inoculation (hpi). (-) No significant change in expression
More information about the genes can be found in Additional file 3: Table S3