Table 9.
Description and expression of up-regulated genes encoding putative effector proteins
| Gene ID | Descriptiona | Expression level (hpi)b | |||||
|---|---|---|---|---|---|---|---|
| 1 | 3 | 6 | 12 | 24 | 48 | ||
| SS1G_08557 | salicylate hydroxylase | 4.1 | 5.4 | 5.1 | 3.6 | 5.1 | 10.8 |
| SS1G_00849 | 22kda glycoprotein (AltA-1 allergen) | 7.4 | 3.2 | - | - | - | 7.1 |
| SS1G_10096 | cerato-platanin (PF07249) | 3.8 | 3.7 | - | - | - | 3.3 |
| SS1G_07295 | cfem domain-containing protein | 2 | - | - | - | 3.9 | 4.8 |
| SS1G_12336 | chitin binding protein | - | 3.3 | - | - | - | - |
| SS1G_12509 | LysM domain protein | - | - | - | 3.8 | 11.8 | 35.4 |
| SS1G_03611 | cysteine-rich protein | - | - | - | - | 85.1 | 247 |
| SS1G_11912 | npp1 domain protein (NEP2) | - | - | - | - | 5.8 | 8.2 |
| SS1G_03282 | serine protease inhibitor | - | - | - | - | - | 2.2 |
| SS1G_02904 | cyanoVirin-N homology (SsCVNH) | - | - | - | - | - | 3.9 |
| SS1G_00263 | protein unique to S. sclerotiorum and B. cinerea (Ssv263) | - | - | - | - | - | 49.2 |
| SS1G_02068 | predicted protein (SsSSVP1) | - | - | - | - | - | 21.5 |
aAnnotation based on the presence of conserved PFAM domains and BLAST reports
bFold change relative to 0 h post inoculation (hpi). (-) No significant change in expression
More information about the genes can be found in Additional file 3: Table S3