Table 2. Summary of differential expression.
The table shows the results of the EdgeR pair-wise comparisons between developmental stages, L4 to 120 days post infection (dpi) in males (M) and females (F). Genes are said to be up-regulated if they are higher in the second developmental stage in the comparison, and down-regulated if they are lower in the second developmental stage.
| Stage | L4-F30 | F30-F42 | F42-F120 | F30-F120 | L4-M30 | M30-M42 | M42-M120 | M30-M120 | F30-M30 | F42-M42 | F120-M120 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Wolbachia Genes | 682 | 673 | 728 | 728 | 682 | 681 | 689 | 691 | 673 | 678 | 734 |
| Total DE Wolbachia | 7 (1.0%) | 0 | 34 (4.7%) | 27 (3.7%) | 3 (0.4%) | 0 | 7 (1.0%) | 4 (0.6%) | 0 | 0 | 17 (2.3%) |
| Wolbachia Up | 1 | 0 | 17 | 15 | 0 | 0 | 3 | 3 | 0 | 0 | 12 |
| Wolbachia Down | 6 | 0 | 17 | 12 | 3 | 0 | 4 | 1 | 0 | 0 | 5 |
| Brugia Genes | 9,269 | 9,431 | 10,424 | 10,295 | 9,384 | 9,929 | 10,386 | 10,356 | 9,517 | 9,892 | 10,643 |
| Total DE Brugia | 1,129 (12.2%) | 13 (0.1%) | 1,350 (13.0%) | 4,113 (40.0%) | 930 (9.9%) | 2,036 (20.5%) | 3,101 (29.9%) | 3,580 (34.6%) | 1,243 (13.1%) | 456 (4.6%) | 5,281 (49.6%) |
| Brugia Up | 474 | 12 | 805 | 1,995 | 538 | 1,118 | 1,398 | 1,535 | 697 | 265 | 2,817 |
| Brugia Down | 655 | 1 | 545 | 2,118 | 392 | 918 | 1,703 | 2,045 | 546 | 191 | 2,464 |