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. 2017 Mar 30;11(3):e0005357. doi: 10.1371/journal.pntd.0005357

Table 2. Summary of differential expression.

The table shows the results of the EdgeR pair-wise comparisons between developmental stages, L4 to 120 days post infection (dpi) in males (M) and females (F). Genes are said to be up-regulated if they are higher in the second developmental stage in the comparison, and down-regulated if they are lower in the second developmental stage.

Stage L4-F30 F30-F42 F42-F120 F30-F120 L4-M30 M30-M42 M42-M120 M30-M120 F30-M30 F42-M42 F120-M120
Wolbachia Genes 682 673 728 728 682 681 689 691 673 678 734
Total DE Wolbachia 7 (1.0%) 0 34 (4.7%) 27 (3.7%) 3 (0.4%) 0 7 (1.0%) 4 (0.6%) 0 0 17 (2.3%)
Wolbachia Up 1 0 17 15 0 0 3 3 0 0 12
Wolbachia Down 6 0 17 12 3 0 4 1 0 0 5
Brugia Genes 9,269 9,431 10,424 10,295 9,384 9,929 10,386 10,356 9,517 9,892 10,643
Total DE Brugia 1,129 (12.2%) 13 (0.1%) 1,350 (13.0%) 4,113 (40.0%) 930 (9.9%) 2,036 (20.5%) 3,101 (29.9%) 3,580 (34.6%) 1,243 (13.1%) 456 (4.6%) 5,281 (49.6%)
Brugia Up 474 12 805 1,995 538 1,118 1,398 1,535 697 265 2,817
Brugia Down 655 1 545 2,118 392 918 1,703 2,045 546 191 2,464