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. Author manuscript; available in PMC: 2017 Aug 22.
Published in final edited form as: Obesity (Silver Spring). 2017 Feb 22;25(4):757–764. doi: 10.1002/oby.21775

Table 2.

Main results of significant SNPs at 20p11.

FHS (N=6004) KCOS (N=2207) OOS (N=968) Meta (N=9179)




rs# Position Alleles EAF beta p beta p beta p beta p I2 (%)
rs910983 19738164 C/T 0.36 −0.11 1.00×10−6 −0.07 0.02 −0.12 0.02 −0.10 4.94×10−9 0.0
rs111678496 19744988 M/W 0.64 0.11 4.25×10−7 0.07 0.02 0.12 0.02 0.10 2.08×10−9 0.0
rs16981092 19745011 A/G 0.64 0.11 6.18×10−7 0.07 0.03 0.12 0.01 0.10 3.49×10−9 0.0
rs6112563 19745561 C/T 0.36 −0.11 5.94×10−7 −0.07 0.03 −0.12 0.02 −0.10 3.35×10−9 0.0
rs6112565 19748442 A/G 0.68 0.11 4.04×10−7 0.09 0.01 0.10 0.07 0.10 1.84×10−9 0.0
rs2069126 19749957 A/G 0.36 −0.11 3.26×10−7 −0.07 0.03 −0.12 0.02 −0.10 1.82×10−9 0.0
rs78194863 19751524 C/G 0.76 0.12 4.52×10−8 0.05 0.14 0.07 0.21 0.10 2.99×10−8 30.3
rs6046308 19755673 G/T 0.26 −0.12 1.95×10−8 −0.05 0.17 −0.04 0.38 −0.09 3.74×10−8 49.1
rs6046310 19757284 A/G 0.74 0.13 6.22×10−9 0.05 0.15 0.06 0.27 0.10 8.03×10−9 47.5
rs12481515 19777184 C/T 0.84 0.14 5.87×10−8 0.08 0.05 0.03 0.66 0.11 4.48×10−8 40.7

Notes: The first and second alleles represent the effect and alternative alleles. EAF was the effect allele frequency. rs111678496 is an DIV, where "M" and "W" represent mutant (TGCTAGTCAGAT) and wild (-) alleles, respectively. Beta is the regression coefficient of normalized phenotypic residual on the effect allele.GWS significant p-values were marked in bold.