Table 2.
FHS (N=6004) | KCOS (N=2207) | OOS (N=968) | Meta (N=9179) | |||||||||
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rs# | Position | Alleles | EAF | beta | p | beta | p | beta | p | beta | p | I2 (%) |
rs910983 | 19738164 | C/T | 0.36 | −0.11 | 1.00×10−6 | −0.07 | 0.02 | −0.12 | 0.02 | −0.10 | 4.94×10−9 | 0.0 |
rs111678496 | 19744988 | M/W | 0.64 | 0.11 | 4.25×10−7 | 0.07 | 0.02 | 0.12 | 0.02 | 0.10 | 2.08×10−9 | 0.0 |
rs16981092 | 19745011 | A/G | 0.64 | 0.11 | 6.18×10−7 | 0.07 | 0.03 | 0.12 | 0.01 | 0.10 | 3.49×10−9 | 0.0 |
rs6112563 | 19745561 | C/T | 0.36 | −0.11 | 5.94×10−7 | −0.07 | 0.03 | −0.12 | 0.02 | −0.10 | 3.35×10−9 | 0.0 |
rs6112565 | 19748442 | A/G | 0.68 | 0.11 | 4.04×10−7 | 0.09 | 0.01 | 0.10 | 0.07 | 0.10 | 1.84×10−9 | 0.0 |
rs2069126 | 19749957 | A/G | 0.36 | −0.11 | 3.26×10−7 | −0.07 | 0.03 | −0.12 | 0.02 | −0.10 | 1.82×10−9 | 0.0 |
rs78194863 | 19751524 | C/G | 0.76 | 0.12 | 4.52×10−8 | 0.05 | 0.14 | 0.07 | 0.21 | 0.10 | 2.99×10−8 | 30.3 |
rs6046308 | 19755673 | G/T | 0.26 | −0.12 | 1.95×10−8 | −0.05 | 0.17 | −0.04 | 0.38 | −0.09 | 3.74×10−8 | 49.1 |
rs6046310 | 19757284 | A/G | 0.74 | 0.13 | 6.22×10−9 | 0.05 | 0.15 | 0.06 | 0.27 | 0.10 | 8.03×10−9 | 47.5 |
rs12481515 | 19777184 | C/T | 0.84 | 0.14 | 5.87×10−8 | 0.08 | 0.05 | 0.03 | 0.66 | 0.11 | 4.48×10−8 | 40.7 |
Notes: The first and second alleles represent the effect and alternative alleles. EAF was the effect allele frequency. rs111678496 is an DIV, where "M" and "W" represent mutant (TGCTAGTCAGAT) and wild (-) alleles, respectively. Beta is the regression coefficient of normalized phenotypic residual on the effect allele.GWS significant p-values were marked in bold.