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. 2017 Mar 14;18(Suppl 3):53. doi: 10.1186/s12859-017-1464-8

Table 2.

Overlaps of deletion predictions of the four SV detection algorithms with golden standard deletions in Mills el. al. 2011

Software Total reported deletion Deletions in golden standard Precision Recall rate
Delly 1075 358/545 0.33 0.66
BreakDancer 779 328/545 0.42 0.60
Gasv-pro 1382 339/545 0.25 0.62
Meerkat 687 372/545 0.54 0.68