Table 1.
Nucleotide sequences for E. histolytica primers for stem LAMP test based on 18S rRNA and HLY6 genes
Target | Primer name | Sequence (5′–3′) | Bases | Final amplicon size |
---|---|---|---|---|
18S rRNA gene | F3 | AAATACAAGGATAGCTTTGTG | 21 | |
B3 | AAGCTCCCTCTCCGATGTC | 19 | ||
FIP | CTCAATTCATTGAATGAATTGGCATGATAAAGATAATACTTGAGAC | 46 | 207 | |
BIP | CAATGAGAATTTCTGATCTATCCGTTATCCGTTATAATCTTGG | 43 | ||
LF | TTTGTACTAATACAAACTGGATC | 23 | ||
LB | CAGTTGGTAGTATCGAGGAC | 20 | ||
SF | CGACAATTGTAGAACACACAG | 21 | ||
SB | ATCCTAACTCACTTAGAATGTC | 22 | ||
HLY6 | F3 | ATACTTGAACGGATTG AAGCC | 21 | |
B3 | GTTTATTCATATGTTTGACAAGA | 22 | ||
FIP | CGCCCTATACTCAAATATGACACTTTGGTGGAAGATTCACG | 41 | 190 | |
BIP | AGGAAGGTCAAAGTATTAATAGTGTTGAGTGAATATACTCACC | 43 | ||
LF | GTAATTTGCACGTTAACACTG | 21 | ||
LB | TGGTAAAGATAATGATTAGGTG | 22 | ||
SF | CTGGTTCCACCTGAATATTC | 20 | ||
SB | TACTAGATAGTTCGATGAGTC | 21 |