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. 2017 Mar 14;18(Suppl 2):142. doi: 10.1186/s12864-017-3490-3

Table 1.

Effects on precision and recall for D2.2.301H and D2.2.302H before and following removal of proteins with heavy loadings on the first principal component (PC1 and − PC1 respectively)

Precision Recall F-score Jaccard
301H (PC1) 1.00 0.30 0.46
301H (-PC1) 1.00 0.35 0.52
301H (TT/-PC1) 0.65 0.23 0.34 0.48
302H (PC1) 0.94 0.32 0.48
302H (-PC1) 0.93 0.43 0.59
302H (TT/-PC1) 0.72 0.30 0.42 0.61

TT refers to the standard t-test while TT/-PC1 are the top n-ranked TT-features (restricted to the number of features in –PC1). The Jaccard coefficient indicates limited overlaps amongst the top TT-features associated with –PC1 features