Table 7. Comparison of genome features of five plant mt genomes.
Gene | Brassicales | Salicaceae | Poales | Ginkgoales | Marchantiaceae | |
---|---|---|---|---|---|---|
Arabidopsis thaliana | Populus tremula | Salix suchowensis | Oryza sativa | Ginkgo biloba | Marchantia polymorpha | |
Size(bp) | 366,924 | 783,442 | 644,437 | 491,515 | 346,544 | 186,609 |
GC(%) | 44.77 | 44.75 | 44.98 | 43.84 | 50.36 | 42.41 |
nad1 | + | + | + | + | + | + |
nad2 | + | + | + | + | + | + |
nad3 | + | + | + | + | + | + |
nad4 | + | + | + | + | + | + |
nad4L | + | + | + | + | + | + |
nad5 | + | + | + | + | + | + |
nad6 | + | + | + | + | + | + |
nad7 | + | + | + | + | + | pseudo |
nad9 | + | + | + | + | + | + |
sdh3 | – | – | – | – | + | + |
sdh4 | – | + | + | – | + | + |
cob | + | + | + | + | + | + |
cox1 | + | + | + | + | + | + |
cox2 | + | + | + | + | + | + |
cox3 | + | + | + | + | + | + |
atp1 | + | + | + | + | + | + |
atp4 | + | + | + | + | + | + |
atp6 | + | + | + | + | + | + |
atp8 | + | + | + | + | + | + |
atp9 | + | + | + | + | + | + |
ccmB | + | + | + | + | + | + |
ccmC | + | + | + | + | + | + |
ccmFC | + | + | + | + | + | + |
ccmFN | + | + | + | + | + | + |
matR | + | + | + | + | + | + |
mttB | + | + | + | + | + | + |
rpl2 | + | + | + | + | + | + |
rpl5 | + | – | – | + | + | + |
rpl6 | – | – | – | – | – | + |
rpl10 | – | + | + | – | – | – |
rpl16 | + | pseudo | + | + | + | + |
rps1 | – | + | – | + | + | + |
rps2 | – | – | – | + | + | + |
rps3 | + | + | + | + | + | + |
rps4 | + | + | + | + | + | + |
rps7 | + | + | + | + | + | + |
rps8 | – | – | – | – | – | + |
rps10 | + | – | – | – | + | + |
rps11 | – | – | – | pseudo | + | + |
rps12 | + | + | + | + | + | + |
rps13 | – | – | – | + | + | + |
rps14 | + | + | – | pseudo | + | + |
rps19 | – | – | – | + | + | + |
trnA-UGC | – | – | – | – | – | + |
trnC-GCA | + | + | + | + | + | + |
trnD-GUC | + | + | + | + | + | + |
trnE-UUC | + | + | + | + | + | + |
trnF-GAA | – | + | + | + | + | + |
trnG-GCC | + | + | + | – | + | + |
trnG-UCC | – | – | – | – | – | + |
trnH-GUG | + | + | + | + | + | + |
trnI-CAU | + | – | – | + | – | + |
trnI-GAU | – | – | – | – | – | – |
trnK-UUU | + | + | + | + | + | + |
trnL-CAA | – | – | – | – | – | + |
trnL-UAA | – | – | – | – | + | + |
trnL-UAG | – | – | – | – | + | + |
trnM-CAU | + | + | + | + | + | + |
trnfM-CAU | + | + | + | + | + | + |
trnN-GUU | + | + | + | + | – | + |
trnP-UGG | + | + | + | + | + | + |
trnQ-UUG | + | + | + | + | + | + |
trnR-ACG | – | – | – | – | + | + |
trnR-UCG | – | – | – | – | – | + |
trnR-UCU | – | – | – | – | + | + |
trnS-GCU | + | + | + | + | + | + |
trnS-UGA | + | + | + | + | + | + |
trnS-GGA | + | + | + | + | – | – |
trnT-GGU | – | – | – | – | – | + |
trnT-UGU | – | – | – | – | – | – |
trnV-UAC | – | – | – | – | – | + |
trnV-GAC | – | – | + | – | – | – |
trnW-CCA | + | + | + | + | + | + |
trnY-GUA | + | + | + | + | + | + |