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. 2014 Sep 15;4:6356. doi: 10.1038/srep06356

Table 2. Prioritized Drug Targets: Ranking putative drug targets from targetTB H-list, based on the number of connections to approved drugs from the databases used in this study. The description of each protein along with its clustering coefficient (CC) value in the bipartite network has been listed. The essentiality inference of the targets obtained from Ghosh et.al 2013, has also been indicated, these include (A) Microarray analysis, (B) Flux balance analysis, (C) Protein-protein interaction analysis, (D) Phyletic retention analysis and (E) Transposon hybridization experiments.

Protein Gene Name CCbp Essentiality Inference Protein Description
Rv2158c murE 0.77 A; B; C; D; E ProbableUDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase MurE
Rv2842c Rv2842c 0.72 A Conserved hypothetical protein
Rv3303c lpdA 0.71 A; D; E NAD(P)H quinone reductase LpdA
Rv2335 cysE 0.66 A; B; C; E Probable serine acetyltransferase CysE (sat)
Rv2398c cysW 0.63 A; D; E Probable sulfate-transport integral membrane protein ABC transporter CysW
Rv2689c Rv2689c 0.61 A; D Conserved alanine and valine and glycine rich protein
Rv3139 fadE24 0.59 A; D; E Probable acyl-CoA dehydrogenase FadE24
Rv2935 ppsE 0.58 A; B Phenolpthiocerol synthesis type-I polyketide synthase PpsE
Rv2026c Rv2026c 0.58 A; D; E Conserved hypothetical protein
Rv0914c Rv0914c 0.55 A; D Possible lipid carrier protein or keto acyl-CoA thiolase
Rv3343c ppe54 0.52 A; E PPE family protein PPE54
Rv2388c hemN 0.52 A; B; C; D Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase)
Rv0542c menE 0.48 A; C; D; E Possible O-succinylbenzoic acid--CoA ligase MenE (OSB-CoA synthetase) (O-succinylbenzoate-CoA synthase)
Rv3245c mtrB 0.48 A; D; E Two component sensory transduction histidine kinase MtrB
Rv2900c fdhF 0.46 A Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H)
Rv0220 lipC 0.45 A; D Probable esterase LipC
Rv1220c Rv1220c 0.45 A Probable methyltransferase
Rv3801c fadD32 0.43 A; B; D; E Fatty-acid-AMP ligase FadD32 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase). Also shown to have acyl-ACP ligase activity.
Rv1613 trpA 0.43 A; B; E Probable tryptophan synthase, alpha subunit TrpA
Rv2573 Rv2573 0.42 A; B; C; E Conserved hypothetical protein
Rv2678c hemE 0.42 A; B; C; E Probable uroporphyrinogen decarboxylase HemE (uroporphyrinogen III decarboxylase) (URO-D) (UPD)