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. Author manuscript; available in PMC: 2018 Jun 1.
Published in final edited form as: Infect Genet Evol. 2016 Nov 4;50:110–120. doi: 10.1016/j.meegid.2016.10.029

Table 3.

Selected set of SNPs and InDels with synonymous variant effect or relevant impact on gene function.

2938_HV 1948_hV

SNPs Indels SNPs Indels
Synonymous variant 9,144 0 10,054 0
Splice region 19 11 25 5
Stop lost 22 21 26 20
Frameshift variant 0 375 0 371
start_ lost 13 4 16 4
Inframe insertion 0 174 0 173

Total 9,198 585 10,121 573