Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2017 Mar 23;8:14788. doi: 10.1038/ncomms14788

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2017, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

PMC Copyright notice

(a) Geographic distributions among 119 accessions. The japonica Hap-KMXBG members are indicated by red circles. Other japonica and indica accessions are indicated by solid blue or hollow triangles, respectively. (b) Phylogram of CTB4a generated from 459 diverse rice accessions including the Tej, Trj, Ind, Aro, Aus and O. rufipogon showing divergence between the Hap-KMXBG and Hap-Towada. (c) Haplotype network of CTB4a. Circle size is proportional to the number of samples for a given haplotype. Black spots represent unobserved, but inferred haplotypes. Lines between haplotypes represent mutational steps between alleles. The black square with dotted arrow encloses rice lines with the CTB4a Hap-KMXBG type SNPs and the solid arrow indicates the CTB4a SNPs of Hap-Towada type. (d) Nucleotide diversity of CTB4a in cultivar populations and the wild rice group. The X-axis denotes the position of CTB4a and the Y-axis indicates average π values.