Table 1. Comparison results for three method on four GRN cases, where three criteria are listed and the scores with the excellent performances are highlighted.

	AUC(ROC)			YOUDEN			AUC(PvsR)
	CMS	CCM	IOTA	CMS	CCM	IOTA	CMS	CCM	IOTA
Ecoli50	0.98	0.43	0.88	0.93	0.15	0.67	0.45	0.02	0.16
Yeast100	0.95	0.68	0.75	0.79	0.51	0.5	0.18	0.02	0.17
Yeast150	0.84	0.59	0.74	0.53	0.28	0.51	0.05	0.01	0.12
SCN	0.74	0.53	0.37	0.38	0.13	0.03	0.25	0.14	0.09