TABLE 1.
Name | Structure | Specific activitya |
Reaction yieldb |
||
---|---|---|---|---|---|
103S_EGCase I | M777_EGCase II | 103S_EGCase I | M777_EGCase II | ||
nmol/min/μg | % | % | |||
GlcCer | Glcβ1–1′Cer | <0.0001 | <0.0001 | 0 | 0 |
GalCer | Galβ1–1′Cer | <0.0001 | <0.0001 | 0 | 0 |
LacCer | Galβ1–4Glcβ1–1′Cer | 1.80 ± 0.15 | 0.24 ± 0.02 | 62.8 ± 5.5 | 44.6 ± 5.1 |
GM3 | NeuAcα2–3Galβ1–4Glcβ1–1′Cer | 4.93 ± 0.64 | 0.61 ± 0.04 | 100 ± 3.0 | 95.9 ± 3.5 |
GM1 | Galβ1–3GalNAcβ1–4 (NeuAcα2–3)Galβ1–4Glcβ1–1′Cer | 6.44 ± 0.49 | 0.19 ± 0.03 | 100 ± 4.6 | 35.2 ± 4.3 |
Fucosyl-GM1 | Fucα1–2Galβ1–3GalNAcβ1–4 (NeuAcα2–3)Galβ1–4Glcβ1–1′Cer | 3.21 ± 0.25 | <0.0001 | 65.8 ± 3.2 | 0 |
Gb4Cer | GalNAcβ1–3Galα1–4Galβ1–4Glcβ1–1′Cer | 0.45 ± 0.05 | <0.0001 | 95.4 ± 3.3 | 6.3 ± 1.5 |
a The substrate specificity toward various GSLs is presented as the specific hydrolytic activities in the initial stage of the reaction. Values represent the means ±S.D. (n = 3).
b The substrate specificity toward various GSLs is presented as the reaction yield (%) when the reaction reached equilibrium and was calculated using the equation, peak area for oligosacchrides ×100/peak area for 0.5 mm oligosaccharide. Values represent means ±S.D. (n = 3). Representative HPLC chromatograms of the reaction yield assay are presented in supplemental Fig. S2.